Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s309_65V6.1 |
Family | GH3 |
Protein Properties | Length: 630 Molecular Weight: 69206.9 Isoelectric Point: 9.853 |
Chromosome | Chromosome/Scaffold: 309 Start: 351415 End: 354640 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 108 | 342 | 0 |
AMQTRLKIPIIYGTDAVHGNNNVYGATIFPHNIGLGCTRDPNLVRRIGSATALEVRATGITYTFAPCIAVCRDPRWGRCYESYSEDPEVVRSMTTIIDGL QGQCPAGWRGPYLESNRKVLACAKHFVGDGGTWQGKDMGNAIMNYDTLVKTHMRAYPDAIAKGVSTIMVSYSSWNKQKMHANKFLLTDVLKGRLGFRGIV ISDWQGIDRISDPWGANYINSVRQGINAGIDIVMV |
Full Sequence |
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Protein Sequence Length: 630 Download |
MGSMLQWRLC SLAVVLVSCF LAQEAVAQRP RYMDPRQPVE VRVNDLLSRM TLDEKIGQMT 60 QIERGVASPS VIEKYKIGSI LSGGGSEPSY RATPSQWMSM TNSFQWGAMQ TRLKIPIIYG 120 TDAVHGNNNV YGATIFPHNI GLGCTRDPNL VRRIGSATAL EVRATGITYT FAPCIAVCRD 180 PRWGRCYESY SEDPEVVRSM TTIIDGLQGQ CPAGWRGPYL ESNRKVLACA KHFVGDGGTW 240 QGKDMGNAIM NYDTLVKTHM RAYPDAIAKG VSTIMVSYSS WNKQKMHANK FLLTDVLKGR 300 LGFRGIVISD WQGIDRISDP WGANYINSVR QGINAGIDIV MVPFDYVKFI NIVKGHVATG 360 AIPIGRINDA VSRILRVKFQ ARLFEYPYAD NSLRTYLGSL QHGALAREAV RKSLVLLKNG 420 GGAKKKLLPL NKYASKILVV GAHANDIGLQ CGGWTISWQG GRGATTKGTT ILGGIRQVIG 480 RNSEVVYQPN PSAGYAKGKG FEYAIVVVGE QPYAEVNGDN LNNLNMPAPY PALIKDTCSN 540 VACVVVMISG RPLVVEPYLG YMNAFVAAWL PGSEGRGVAE VLFGNYEFSG RLSRTWFRRV 600 DQLPMNVGDR YYNPLFPFGY GMKMGLKRA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-32 | 6 | 622 | 684 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-43 | 436 | 621 | 205 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-75 | 8 | 622 | 695 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-82 | 50 | 477 | 441 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-86 | 51 | 377 | 331 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM13694.1 | 0 | 14 | 622 | 10 | 618 | beta-D-glucan exohydrolase [Triticum aestivum] |
RefSeq | XP_001761531.1 | 0 | 32 | 628 | 17 | 612 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777176.1 | 0 | 12 | 626 | 7 | 630 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781708.1 | 0 | 4 | 629 | 1 | 626 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001786487.1 | 0 | 18 | 626 | 17 | 627 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 32 | 622 | 5 | 597 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
PDB | 1x38_A | 0 | 32 | 622 | 5 | 597 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
PDB | 1lq2_A | 0 | 32 | 622 | 5 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 32 | 622 | 5 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 32 | 622 | 5 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |