Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s313_34V6.1 |
Family | GH47 |
Protein Properties | Length: 625 Molecular Weight: 69518.9 Isoelectric Point: 5.398 |
Chromosome | Chromosome/Scaffold: 313 Start: 124336 End: 131524 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 63 | 488 | 0 |
MFYHGFDNYMEYAFPLDELRPMSCTGEDSLGGYSLTLVDSLDMLALLGDRARFSKGVNWLGKNLSFDKNKTVSVFETTIRMLGGLLSAHLIASDASTGMQ VDLYDNELLRLAEDLGRRMLPAFDTPTGIPFGSVNLALGVSDDESQVSSTAGGGTLTLEFGVLSRLTGDPEFEKVTKRAVLGLWAQRSRLGLVGGHINVF TSEWTHKDAGIGTSIDSFYEYLLKAYLLLGDEEYLYMFKEAYKSVMRHLHNDPWYLEVNMNSGVVVWPLFNSLQAFWPGLQVLAGDVEPAVRTHKAFFAV WKRYGFTPEGFNLATSSVQPGQRSYPLRPELVESTYMLYKATRNPMYLDVGRDVVASLQRSAKCRCGYCHIADVESHEQDDHMESFFLAETVKYLWLLFD LGAGGDNLVEKGPYPYIFNTEGHFLP |
Full Sequence |
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Protein Sequence Length: 625 Download |
MMVKHRRRMG GVSPATWLLL SLPALLCFAG LPFMLSSPAI SLATAASVSA REAADLRDEV 60 KDMFYHGFDN YMEYAFPLDE LRPMSCTGED SLGGYSLTLV DSLDMLALLG DRARFSKGVN 120 WLGKNLSFDK NKTVSVFETT IRMLGGLLSA HLIASDASTG MQVDLYDNEL LRLAEDLGRR 180 MLPAFDTPTG IPFGSVNLAL GVSDDESQVS STAGGGTLTL EFGVLSRLTG DPEFEKVTKR 240 AVLGLWAQRS RLGLVGGHIN VFTSEWTHKD AGIGTSIDSF YEYLLKAYLL LGDEEYLYMF 300 KEAYKSVMRH LHNDPWYLEV NMNSGVVVWP LFNSLQAFWP GLQVLAGDVE PAVRTHKAFF 360 AVWKRYGFTP EGFNLATSSV QPGQRSYPLR PELVESTYML YKATRNPMYL DVGRDVVASL 420 QRSAKCRCGY CHIADVESHE QDDHMESFFL AETVKYLWLL FDLGAGGDNL VEKGPYPYIF 480 NTEGHFLPMS PEISLPAEHC TYAGSFCRER VVGRLAAVKK NLKKELLSNR QEEEDSTGHC 540 KDSNLNGQTC FDLHNDSEEP GIGDNDWTAS LRSPLKGMCP RLNHWRQVGF DPGSQPRATP 600 RAKPGPIERE DSYSPRKEAI FDEG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 1.0e-81 | 57 | 491 | 476 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 1.0e-174 | 63 | 489 | 462 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD52943.1 | 0 | 48 | 611 | 40 | 582 | putative aspartyl(D) tRNA Synthetase (89.0 kD)(drs-2C) [Oryza sativa Japonica Group] |
RefSeq | NP_001044401.1 | 0 | 48 | 611 | 48 | 590 | Os01g0773600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_199184.1 | 0 | 17 | 616 | 7 | 560 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_001781847.1 | 0 | 1 | 624 | 114 | 768 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002311656.1 | 0 | 45 | 590 | 1 | 529 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x9d_A | 0 | 38 | 489 | 75 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fo3_A | 0 | 60 | 489 | 14 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fo2_A | 0 | 60 | 489 | 14 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 0 | 60 | 489 | 14 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1nxc_A | 0 | 48 | 492 | 7 | 468 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |