| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s317_21V6.1 |
| Family | GH51 |
| Protein Properties | Length: 680 Molecular Weight: 73759.2 Isoelectric Point: 6.058 |
| Chromosome | Chromosome/Scaffold: 317 Start: 156819 End: 161560 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 201 | 651 | 0 |
| NARLSLTSGTRSVFWVDQVSGMPTDTFKARKGLGHGFRKELATMISDLKPGFLRFPGGCYVEGARLVNAFRWRDSVGPYENRPGHYGDVWYYWSDDGFGY FEGLQLAEDLGAAPIWVFNNGISHEQSVSTDVIGPWVQDVLEGIEFARGPVSSKYGAMRASMGHPDPFPLHHVAIGNEDCYKPYYKENYMEFYKAIKLLY PDIQVISNCDGSGAALDHPADLYDYHIYTNANNLFSMRHQFDKTSRSGPKAFVSEYAVTGSDSGKGSLLASLAEGAFLIGLELNSDVVHMASYAPLFVND NDRRWNPDAIVFNSWQQYGTPSYWVQQFFKKSNGAYLISSTMEADSASALANLATSAVRTYNASTGMEYMIVKAVNFGSSALNLSIAVSGISANNVVAAD SHITVMTSGAVMDENSFTNPKKVVPQVSQAENAAPNMQILLPAHSITALEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 680 Download |
| MANSLLCILV VAFTTHLVVP ALAQSTVTLK VNATNPGRQI PSTLFGLFFE EINHAGDGGL 60 WAELVQNRGF EAGGLNVPSI IEPWYKIGTA AQITIGTECS SPHARNPVAL KIEVLCDNND 120 ASLQCPKGGV GVANPGFWGM NILSGSKYRV EYWLKTTSSF NLSVAFTSAN GTVLAQEHVS 180 LNAGEWRKYS VVLMATSTDH NARLSLTSGT RSVFWVDQVS GMPTDTFKAR KGLGHGFRKE 240 LATMISDLKP GFLRFPGGCY VEGARLVNAF RWRDSVGPYE NRPGHYGDVW YYWSDDGFGY 300 FEGLQLAEDL GAAPIWVFNN GISHEQSVST DVIGPWVQDV LEGIEFARGP VSSKYGAMRA 360 SMGHPDPFPL HHVAIGNEDC YKPYYKENYM EFYKAIKLLY PDIQVISNCD GSGAALDHPA 420 DLYDYHIYTN ANNLFSMRHQ FDKTSRSGPK AFVSEYAVTG SDSGKGSLLA SLAEGAFLIG 480 LELNSDVVHM ASYAPLFVND NDRRWNPDAI VFNSWQQYGT PSYWVQQFFK KSNGAYLISS 540 TMEADSASAL ANLATSAVRT YNASTGMEYM IVKAVNFGSS ALNLSIAVSG ISANNVVAAD 600 SHITVMTSGA VMDENSFTNP KKVVPQVSQA ENAAPNMQIL LPAHSITALE LGLLPTKSST 660 ATLEVTQVTS KDSKAPFLV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 4.0e-26 | 225 | 653 | 502 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 6.0e-36 | 454 | 645 | 204 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 2.0e-42 | 454 | 645 | 201 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR16223.1 | 0 | 6 | 653 | 11 | 654 | unknown [Picea sitchensis] |
| GenBank | ACN40206.1 | 0 | 6 | 653 | 11 | 655 | unknown [Picea sitchensis] |
| RefSeq | XP_001768782.1 | 0 | 40 | 673 | 1 | 631 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001782031.1 | 0 | 1 | 679 | 1 | 679 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002523672.1 | 0 | 23 | 673 | 36 | 677 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 0.000000000000006 | 235 | 653 | 67 | 503 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 3ug5_E | 0.000000000000006 | 235 | 653 | 67 | 503 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 3ug5_D | 0.000000000000006 | 235 | 653 | 67 | 503 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 3ug5_C | 0.000000000000006 | 235 | 653 | 67 | 503 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 3ug5_B | 0.000000000000006 | 235 | 653 | 67 | 503 | A Chain A, Arabidopsis Thaliana Peroxidase N |
