CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s32_144V6.1
FamilyGT92
Protein PropertiesLength: 524 Molecular Weight: 60408.6 Isoelectric Point: 7.5511
ChromosomeChromosome/Scaffold: 32 Start: 874585 End: 876737
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922565030
  DYVYCGSSVYGDISPQRMREWMAYHAKLFGDGSHFILHDSGGFHDDVRKVIEPWIKQGRVTLQNIRQQEIFDGYYHNQFLIVNDCLFRSRFLANWTFFFD
  IDEFIFVEPTTTLSAVLNENPNITQITIEQTPMAKDLCVADNTTSGEHESRWGFEKLIYRKVLKRGIRYDRKFVVQARHAEATGIHMSMDTRHGQNLYPK
  GDKIRYYHYHGTINKRQEVCTRFVDAGNKTAVQRHEKHYHRLDESMAK
Full Sequence
Protein Sequence     Length: 524     Download
MKMDKNHTVV KVEKETEKVN AKVWSRELGC HTAIKFQMRT FPDVRVNVVY TMIFLIGLIL    60
TAAQLWPLTD FDPKHSCTQP ANQENWERLD KSEPQQPQIF SESFLHEKVD ASSIDTSHGE    120
LRVFKPHGLA THLYIEMSAY RGGPRQFSVV GLTSKPIESH HQPPYACEWV SNATGEVVKG    180
RPHKVLPDWD YGKLYTVVVI TCNFAKDVGV DGEGGELILY ASYGDQYRQP ERIVVLTESK    240
GTYNSSIFDP KNFPYDYVYC GSSVYGDISP QRMREWMAYH AKLFGDGSHF ILHDSGGFHD    300
DVRKVIEPWI KQGRVTLQNI RQQEIFDGYY HNQFLIVNDC LFRSRFLANW TFFFDIDEFI    360
FVEPTTTLSA VLNENPNITQ ITIEQTPMAK DLCVADNTTS GEHESRWGFE KLIYRKVLKR    420
GIRYDRKFVV QARHAEATGI HMSMDTRHGQ NLYPKGDKIR YYHYHGTINK RQEVCTRFVD    480
AGNKTAVQRH EKHYHRLDES MAKLAKDVKL FELNTVGAQP FIV* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam01697Glyco_transf_926.0e-14255449206+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_565768.1010751888490unknown protein [Arabidopsis thaliana]
RefSeqXP_001758423.10525231472predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001758982.101325182386predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001775945.101225171396predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001777796.101375231382predicted protein [Physcomitrella patens subsp. patens]
Transmembrane Domains
StartEnd
4668
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GE4804472941224090
DV9967542751223940
HO7805324071225190
HO7963983801495190
ES7990923181224390
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1
Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1Pp1s25_268V6.1
Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)