y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s32_160V6.1 |
Family | AA6 |
Protein Properties | Length: 202 Molecular Weight: 21538.6 Isoelectric Point: 6.5239 |
Chromosome | Chromosome/Scaffold: 32 Start: 931780 End: 933646 |
Description | flavodoxin-like quinone reductase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 4 | 198 | 0 |
KVYIVYYSMYGHIETLAKEIKKGAESVEGVEASLYQVPETLPEEVLGKMGAPQKSEVPHISPADLPNADGFLFGFPTRYGMMAAQFKAFLDATGGLWRTQ SLAGKPAGIFISTGSQGGGQETTALTAITQLTHHGMIFVPIGYTFGAGMFEINEVKGGSPYGAGTLAGDGTRQPTKLELEQAFYQGKYTAEITKK |
Full Sequence |
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Protein Sequence Length: 202 Download |
MAVKVYIVYY SMYGHIETLA KEIKKGAESV EGVEASLYQV PETLPEEVLG KMGAPQKSEV 60 PHISPADLPN ADGFLFGFPT RYGMMAAQFK AFLDATGGLW RTQSLAGKPA GIFISTGSQG 120 GGQETTALTA ITQLTHHGMI FVPIGYTFGA GMFEINEVKG GSPYGAGTLA GDGTRQPTKL 180 ELEQAFYQGK YTAEITKKLK Q* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 3.0e-7 | 7 | 113 | 119 | + Flavodoxin. | ||
pfam03358 | FMN_red | 4.0e-12 | 17 | 146 | 131 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 1.0e-37 | 1 | 200 | 207 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 1.0e-63 | 3 | 199 | 198 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 2.0e-76 | 3 | 200 | 199 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94567.1 | 0 | 1 | 200 | 1 | 200 | unknown [Populus trichocarpa] |
RefSeq | XP_001758337.1 | 0 | 1 | 201 | 1 | 201 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762556.1 | 0 | 1 | 201 | 1 | 201 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002283286.1 | 0 | 1 | 201 | 1 | 201 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319258.1 | 0 | 1 | 200 | 1 | 200 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3b6m_B | 0 | 4 | 200 | 3 | 197 | A Chain A, Solution Structure Of Dc1 Domain Of Pdi-Like Hypothetical Protein From Arabidopsis Thaliana |
PDB | 3b6m_A | 0 | 4 | 200 | 3 | 197 | A Chain A, Solution Structure Of Dc1 Domain Of Pdi-Like Hypothetical Protein From Arabidopsis Thaliana |
PDB | 3b6k_B | 0 | 4 | 200 | 3 | 197 | A Chain A, Solution Structure Of Dc1 Domain Of Pdi-Like Hypothetical Protein From Arabidopsis Thaliana |
PDB | 3b6k_A | 0 | 4 | 200 | 3 | 197 | A Chain A, Solution Structure Of Dc1 Domain Of Pdi-Like Hypothetical Protein From Arabidopsis Thaliana |
PDB | 3b6j_B | 0 | 4 | 200 | 3 | 197 | A Chain A, Solution Structure Of Dc1 Domain Of Pdi-Like Hypothetical Protein From Arabidopsis Thaliana |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC413609 | 202 | 1 | 202 | 0 |
BJ953383 | 202 | 1 | 202 | 0 |
DC944545 | 202 | 1 | 202 | 0 |
DC944721 | 202 | 1 | 202 | 0 |
FC408933 | 202 | 1 | 202 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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