y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s338_21V6.1 |
Family | GT14 |
Protein Properties | Length: 421 Molecular Weight: 47728.3 Isoelectric Point: 9.9988 |
Chromosome | Chromosome/Scaffold: 338 Start: 96645 End: 101275 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 72 | 330 | 0 |
LAYLISGNKGDGMRIRRTLQALYHPRNYYVLHLDLEAPPKERVELARYMRSDPAFQETNNVIMIGKANLVTYRGPTMISTTLHGAAILLRSFKDWDWFIN LSASDYPLVTQDDILHVFSFLPRDLNFIEHTSNIGWKEFQRAKPIIIDPGLYMNRKSDIFWATQRRALPTAFRLFTGKHRSAWAVLSRSFMEFTIMGWDN LPRVLLMYYTNFVSSPEGYFHTVLCNSPEFKNTTVNHDLHYIAWDNPPKQHPLALTLKD |
Full Sequence |
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Protein Sequence Length: 421 Download |
MNTSFSIMER KWRIPLAVSI FISLIMLLIA GMSLKPSTGS YFSFLQREES SIFVENNIVG 60 LPVTSLPAPP RLAYLISGNK GDGMRIRRTL QALYHPRNYY VLHLDLEAPP KERVELARYM 120 RSDPAFQETN NVIMIGKANL VTYRGPTMIS TTLHGAAILL RSFKDWDWFI NLSASDYPLV 180 TQDDILHVFS FLPRDLNFIE HTSNIGWKEF QRAKPIIIDP GLYMNRKSDI FWATQRRALP 240 TAFRLFTGKH RSAWAVLSRS FMEFTIMGWD NLPRVLLMYY TNFVSSPEGY FHTVLCNSPE 300 FKNTTVNHDL HYIAWDNPPK QHPLALTLKD FQNMTSSGAP FARKFSKDDP VLSFIDKQLL 360 GRSPGMFSPG GWCVGAGADP CGVRGDAAVL RPGPGARRLQ GLIERLLAKP RFRSEQCILT 420 * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-78 | 72 | 335 | 268 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 6 | 417 | 422 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24335.1 | 0 | 51 | 417 | 72 | 441 | unknown [Picea sitchensis] |
GenBank | ABK26987.1 | 0 | 34 | 418 | 38 | 424 | unknown [Picea sitchensis] |
RefSeq | XP_001774021.1 | 0 | 54 | 417 | 67 | 429 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001778780.1 | 0 | 8 | 420 | 1 | 389 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001782405.1 | 0 | 63 | 418 | 58 | 410 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000003 | 45 | 300 | 59 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000003 | 45 | 300 | 59 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000003 | 45 | 300 | 59 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000003 | 45 | 300 | 59 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000008 | 45 | 300 | 59 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |