| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s33_144V6.1 |
| Family | GT5 |
| Protein Properties | Length: 624 Molecular Weight: 67897.6 Isoelectric Point: 6.2114 |
| Chromosome | Chromosome/Scaffold: 33 Start: 831011 End: 835700 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 98 | 593 | 0 |
| IIFVAAEVAPWSKTGGLGDVLGGLPPALAARGHRVMTVSPRYDQYKDAWDTSTPTEITIGDRTEMVNFFHTHKRGVDRIFVDHPLYLSKVWGKTGSKIYG PRSGEDYDDNQFRFMLLAKAAIEAAKVLSLDSNEYFNGPYGENVVFVANDWHTALLPCYLKSEYKPAGQFENAKVAFCVHNIAYQGRFAFADFDKLGLPD KFRSSFDFIDGYEKPVKGRKINWMKAGFLESDLNMTVSPNYASELSSGVDKGVELDTIVRMEGIIGICNGMDVQEWDPSADKYLDTPYDISTVFDAKPEL KAALQAEVGLPVRPDVPLFGFIGRLEEQKGSDILAEAVKDFLMDDVQLIVLGTGKKHLEKQLEELDSLFPDKAIGVVKFNTPLAHMITAGADFLLVPSRF EPCGLIQLHAMRYGTVPVVASTGGLVDTVEEGVTGFQCGKAFNVDCEVVDPADAELLSATVKRAVKIYGTAQYKKMIRNCMSQDLSWKDPARKWED | |||
| Full Sequence |
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| Protein Sequence Length: 624 Download |
| MAMAMAPTHL CATKGALGIT QPSSSKDAPK CGEMMNGMVS FQGLRTTALT HRVEQMSAMS 60 LVGKVKARSV VSHRRPAAGA RCSTTNGSGG RNHSGMSIIF VAAEVAPWSK TGGLGDVLGG 120 LPPALAARGH RVMTVSPRYD QYKDAWDTST PTEITIGDRT EMVNFFHTHK RGVDRIFVDH 180 PLYLSKVWGK TGSKIYGPRS GEDYDDNQFR FMLLAKAAIE AAKVLSLDSN EYFNGPYGEN 240 VVFVANDWHT ALLPCYLKSE YKPAGQFENA KVAFCVHNIA YQGRFAFADF DKLGLPDKFR 300 SSFDFIDGYE KPVKGRKINW MKAGFLESDL NMTVSPNYAS ELSSGVDKGV ELDTIVRMEG 360 IIGICNGMDV QEWDPSADKY LDTPYDISTV FDAKPELKAA LQAEVGLPVR PDVPLFGFIG 420 RLEEQKGSDI LAEAVKDFLM DDVQLIVLGT GKKHLEKQLE ELDSLFPDKA IGVVKFNTPL 480 AHMITAGADF LLVPSRFEPC GLIQLHAMRY GTVPVVASTG GLVDTVEEGV TGFQCGKAFN 540 VDCEVVDPAD AELLSATVKR AVKIYGTAQY KKMIRNCMSQ DLSWKDPARK WEDSLLGLQV 600 EGSGPGQEGE EIAPKAKANV ATP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 1.0e-86 | 172 | 591 | 433 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 1.0e-102 | 96 | 593 | 519 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-126 | 96 | 593 | 515 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 2.0e-156 | 96 | 598 | 513 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-165 | 98 | 593 | 503 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACH72975.1 | 0 | 43 | 623 | 34 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACM78591.1 | 0 | 43 | 623 | 34 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| Swiss-Prot | Q43784 | 0 | 39 | 623 | 38 | 608 | SSG1_MANES RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
| RefSeq | XP_001757355.1 | 0 | 96 | 623 | 1 | 528 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001758536.1 | 0 | 59 | 623 | 1 | 565 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 96 | 623 | 10 | 536 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3vue_A | 0 | 96 | 623 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3guh_A | 0 | 96 | 601 | 1 | 479 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4u_A | 0 | 96 | 601 | 1 | 479 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4t_A | 0 | 96 | 601 | 1 | 479 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| AJ568414 | 585 | 43 | 624 | 0 |
| HO629148 | 589 | 39 | 624 | 0 |
| HO825853 | 519 | 104 | 622 | 0 |
| HO590491 | 411 | 216 | 624 | 0 |
| FC368651 | 278 | 145 | 422 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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