CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s346_18V6.1
FamilyGT41
Protein PropertiesLength: 622 Molecular Weight: 69214.1 Isoelectric Point: 6.7779
ChromosomeChromosome/Scaffold: 346 Start: 191860 End: 196223
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT41605480
  IKPNFSQSLNNLGVVYTVQGKMDSAASMIEKAILANPSYAEAYNNLGVLHRDAGNIPLAIDAYERCLVIDPDSRNAGQNRLLAMNYIYEGDDDKLYNVHS
  DWGKRFSRLYPEFTTWSNSKDRDRVLTIGYISPDYFTHSVSYFIEAPLLHYDFTNFHLVVYSAVVKTDAKTQRFKDTVLKKGGVWREVYGIDEKKVANMV
  KEDKVDILVELTGHTANNRLGVMARRPAPIQITWIGYPNTTGLSTIDYRFTDALADPPNTTQKHVEELVRLPECFLCYTPSPETGPIVPSPALSNGFVTF
  GSFNNLAKITPRVLRVWARILIKVPTARLVVKCKPFCCDSVRDTFLSKLEELGVKSLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG
  VPCVTMAGKVHAHNVGVTLLHQVGLENLVVRTEDDYVDKAVQLASNTSSLAALRNGLREKMLKSYLCDGPKFVRGLEDTYRQLWHRYCD
Full Sequence
Protein Sequence     Length: 622     Download
MTTEVAFSIT IISSQAVVMY ELALHFNPHC AEACNNLGVI YKDRDNLDKA VECYQMALQI    60
KPNFSQSLNN LGVVYTVQGK MDSAASMIEK AILANPSYAE AYNNLGVLHR DAGNIPLAID    120
AYERCLVIDP DSRNAGQNRL LAMNYIYEGD DDKLYNVHSD WGKRFSRLYP EFTTWSNSKD    180
RDRVLTIGYI SPDYFTHSVS YFIEAPLLHY DFTNFHLVVY SAVVKTDAKT QRFKDTVLKK    240
GGVWREVYGI DEKKVANMVK EDKVDILVEL TGHTANNRLG VMARRPAPIQ ITWIGYPNTT    300
GLSTIDYRFT DALADPPNTT QKHVEELVRL PECFLCYTPS PETGPIVPSP ALSNGFVTFG    360
SFNNLAKITP RVLRVWARIL IKVPTARLVV KCKPFCCDSV RDTFLSKLEE LGVKSLRVDL    420
LPLILLNHDH MQAYSLMDIS LDTFPYAGTT TTCESLYMGV PCVTMAGKVH AHNVGVTLLH    480
QVGLENLVVR TEDDYVDKAV QLASNTSSLA ALRNGLREKM LKSYLCDGPK FVRGLEDTYR    540
QLWHRYCDGD VPYETRKKAE NNALVSLSAS ADLSMEAVST PPQLNSAIVT PTPSPTSTLS    600
MTDGNTSSET RAKCQKLSPS S* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00189TPR2.0e-146615388+
cd00189TPR3.0e-17149279+
cd00189TPR2.0e-2332131100+
COG3914Spy5.0e-9913546555+
Gene Ontology
GO TermDescription
GO:0005515protein binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001782948.10.0000000000045152173324predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001782948.105621283899predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001782948.10.000000000215143108244predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001782948.10.00021611341138predicted protein [Physcomitrella patens subsp. patens]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4gz6_D6e-331533527386A Chain A, Crystal Structure Of Pgae, An Aromatic Hydroxylase Involved In Angucycline Biosynthesis
PDB4gz6_D4e-18357560524723A Chain A, Crystal Structure Of Pgae, An Aromatic Hydroxylase Involved In Angucycline Biosynthesis
PDB4gz6_C6e-331533527386A Chain A, Crystal Structure Of Pgae, An Aromatic Hydroxylase Involved In Angucycline Biosynthesis
PDB4gz6_C4e-18357560524723A Chain A, Crystal Structure Of Pgae, An Aromatic Hydroxylase Involved In Angucycline Biosynthesis
PDB4gz6_B6e-331533527386A Chain A, Crystal Structure Of Pgae, An Aromatic Hydroxylase Involved In Angucycline Biosynthesis
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO7812093492025500
HO781209118902070
DY2954083371284640
GO867600327183440
GT041789337423780
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_058_00216.4.161.321Aquca_058_00216.4.161.321Aquca_058_00216.3.387.547Aquca_058_00216.3.387.547Aquca_058_00216.2
Aquca_058_00216.1.601.761Aquca_058_00216.1.601.761Aquca_072_00077.2Aquca_072_00077.3Aquca_072_00077.1
Arabidopsis lyrata896453.457.745896453.457.745478494
Arabidopsis thalianaAT3G04240.1.457.745AT3G04240.1.457.745AT3G11540.1AT3G11540.2
Brachypodium distachyonBradi3g43577.3.610.769Bradi3g43577.3.610.769Bradi3g43577.2Bradi3g43577.1Bradi5g06647.1.621.781
Bradi5g06647.1.621.781Bradi2g58616.1.592.750Bradi2g58616.1.592.750Bradi3g42910.1
Brassica rapaBra040144.586.743Bra040144.586.743Bra001408Bra034832
Carica papayaevm.model.supercontig_51.46.234.522evm.model.supercontig_51.46.234.522
Capsella rubellaCarubv10012900m.457.745Carubv10012900m.457.745Carubv10013012mCarubv10012928m
Chlamydomonas reinhardtiig13482.t1
Citrus clementinaCiclev10018711m.453.741Ciclev10018711m.453.741Ciclev10011210mCiclev10011021m
Citrus sinensisorange1.1g003557m.291.579orange1.1g003557m.291.579orange1.1g002729m.402.690orange1.1g002729m.402.690orange1.1g002431m.402.690
orange1.1g002431m.402.690orange1.1g005626morange1.1g005594morange1.1g004753morange1.1g007075m
orange1.1g002273morange1.1g003891morange1.1g002443morange1.1g002441morange1.1g002438m
orange1.1g006937morange1.1g007634m
Cucumis sativusCucsa.027630.1.563.753Cucsa.027630.1.563.753Cucsa.083560.1
Eucalyptus grandisEucgr.L00641.1.550.718Eucgr.L00641.1.550.718Eucgr.K02568.1
Fragaria vescamrna16720.1-v1.0-hybrid.551.739mrna16720.1-v1.0-hybrid.551.739mrna15637.1-v1.0-hybrid
Glycine maxGlyma10g31190.2Glyma10g31190.1.468.756Glyma10g31190.1.468.756Glyma20g36330.1.468.756Glyma20g36330.1.468.756
Glyma20g36330.2Glyma19g38241.2Glyma19g38241.1Glyma03g35610.3Glyma03g35610.2
Glyma02g36210.4Glyma02g36210.3Glyma10g08710.1
Gossypium raimondiiGorai.011G150500.2.480.766Gorai.011G150500.2.480.766Gorai.011G150500.1.481.772Gorai.011G150500.1.481.772Gorai.011G150500.3
Gorai.013G189100.3.376.564Gorai.013G189100.3.376.564Gorai.013G189100.2.571.758Gorai.013G189100.2.571.758Gorai.013G189100.1.571.758
Gorai.013G189100.1.571.758Gorai.011G150500.5.520.693Gorai.011G150500.5.520.693Gorai.011G150500.4.520.693Gorai.011G150500.4.520.693
Gorai.007G367900.2Gorai.007G367900.1Gorai.002G238200.2Gorai.002G238200.1
Linum usitatissimumLus10003576.450.737Lus10003576.450.737Lus10004779.456.744Lus10004779.456.744Lus10003113.456.744
Lus10003113.456.744Lus10021336Lus10017009
Malus domesticaMDP0000233292.459.747MDP0000233292.459.747MDP0000119499MDP0000212192MDP0000846748
Manihot esculentacassava4.1_001015m.583.740cassava4.1_001015m.583.740cassava4.1_002695m.313.473cassava4.1_002695m.313.473cassava4.1_002691m.313.473
cassava4.1_002691m.313.473cassava4.1_001021m.581.740cassava4.1_001021m.581.740cassava4.1_001222mcassava4.1_001239m
cassava4.1_001390m
Medicago truncatulaMedtr1g079510.2.224.512Medtr1g079510.2.224.512Medtr1g079510.1.466.754Medtr1g079510.1.466.754
Mimulus guttatusmgv1a000777m.468.756mgv1a000777m.468.756mgv1a000982m.534.691mgv1a000982m.534.691mgv1a000971m
Oryza sativaLOC_Os01g68680.1.495.747LOC_Os01g68680.1.495.747LOC_Os02g28830.1.255.415LOC_Os02g28830.1.255.415LOC_Os08g44510.1
Panicum virgatumPavirv00063187m.616.777Pavirv00063187m.616.777Pavirv00007611mPavirv00052192m
Physcomitrella patensPp1s263_4V6.1.478.766Pp1s263_4V6.1.478.766Pp1s177_132V6.1.476.764Pp1s177_132V6.1.476.764Pp1s456_4V6.1
Pp1s150_16V6.1
Phaseolus vulgarisPhvul.007G119800.1.469.757Phvul.007G119800.1.469.757Phvul.001G192300.2Phvul.001G192300.1Phvul.007G153100.2
Phvul.007G153100.1
Picea abiesMA_76964g0020.246.533MA_76964g0020.246.533MA_247226g0010.309.469MA_247226g0010.309.469MA_869746g0010
MA_475186g0010MA_261690g0010
Populus trichocarpaPotri.013G051400.7.84.372Potri.013G051400.7.84.372Potri.013G051400.6.224.512Potri.013G051400.6.224.512Potri.013G051400.5
Potri.013G051400.4.463.751Potri.013G051400.4.463.751Potri.013G051400.3.463.751Potri.013G051400.3.463.751Potri.013G051400.2.463.751
Potri.013G051400.2.463.751Potri.013G051400.1.463.751Potri.013G051400.1.463.751Potri.019G025600.5.224.512Potri.019G025600.5.224.512
Potri.019G025600.2.459.747Potri.019G025600.2.459.747Potri.019G025600.1.459.747Potri.019G025600.1.459.747Potri.019G025600.6.213.376
Potri.019G025600.6.213.376Potri.019G025600.4.417.580Potri.019G025600.4.417.580Potri.019G025600.3.478.641Potri.019G025600.3.478.641
Potri.006G208900.1Potri.016G075700.4Potri.016G075700.3Potri.016G075700.1Potri.016G075700.2
Potri.006G208900.3Potri.006G208900.2
Prunus persicappa000862m.459.747ppa000862m.459.747ppa001075m
Ricinus communis29680.m001749.589.74729680.m001749.589.74727556.m00005030032.m00047548742.m000013
Setaria italicaSi016363mSi016197m.619.779Si016197m.619.779Si000265m.480.641Si000265m.480.641
Si013329mSi013225m
Selaginella moellendorffii143846.391.643143846.391.643159012
Sorghum bicolorSb04g019560.1.619.779Sb04g019560.1.619.779Sb07g024110.1
Thellungiella halophilaThhalv10020104mThhalv10020000m.431.719Thhalv10020000m.431.719Thhalv10019996m.457.745Thhalv10019996m.457.745
Thhalv10020052mThhalv10020017m
Vitis viniferaGSVIVT01026359001.593.754GSVIVT01026359001.593.754GSVIVT01033891001
Volvox carteriVocar20006483m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)