y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s39_162V6.1 |
Family | GH1 |
Protein Properties | Length: 515 Molecular Weight: 58187.3 Isoelectric Point: 6.4623 |
Chromosome | Chromosome/Scaffold: 39 Start: 662921 End: 667005 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 45 | 504 | 0 |
SNEFPEGFRFGTSSSAYQYEGAVNASGRGPCIWDSASHTPGVIHDNSTGDIATDHYHRYQEDIELMAHLGVGTYRFSIAWTRIFPDGRGPTPNAEGIAFY NRLIDTLLSTGIEPFVTVSHYDLPQTLQDEFGGWRSRHIVPLFTFFAETCFAAFGDRVKYWITINEIHNYAIKYTNIGCRNPSGLCAPGNSSTWVYTAGH HMLLSHAFAVEVYRTKFQTKQGGKIGIVADAQWYEPYSDNPWDIAAVDRMQAFQVRWVLDPIYYGRYPEMLVDRLGDRLPRFSEGEAQLLRGSVDFLGIN HYTTHYAVDQTNSTEQLDSGAASVGSRGGVPIGPKAGSIWLNIVPFGIQKVLNYIRIQYNNPIVYITENGVDEDNDPGIPLDVALKDSFRTKYHVDYLSY VNAAIRDGCDVRGYFIWSLLDNFEWDDGLSKRFGLYYVDYDHNQTRYAKDSAKWFKEFLR |
Full Sequence |
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Protein Sequence Length: 515 Download |
MASSKVTAIW LLVSLFLVDK VVEGRHLVTS VTGSMQNEPR QVRKSNEFPE GFRFGTSSSA 60 YQYEGAVNAS GRGPCIWDSA SHTPGVIHDN STGDIATDHY HRYQEDIELM AHLGVGTYRF 120 SIAWTRIFPD GRGPTPNAEG IAFYNRLIDT LLSTGIEPFV TVSHYDLPQT LQDEFGGWRS 180 RHIVPLFTFF AETCFAAFGD RVKYWITINE IHNYAIKYTN IGCRNPSGLC APGNSSTWVY 240 TAGHHMLLSH AFAVEVYRTK FQTKQGGKIG IVADAQWYEP YSDNPWDIAA VDRMQAFQVR 300 WVLDPIYYGR YPEMLVDRLG DRLPRFSEGE AQLLRGSVDF LGINHYTTHY AVDQTNSTEQ 360 LDSGAASVGS RGGVPIGPKA GSIWLNIVPF GIQKVLNYIR IQYNNPIVYI TENGVDEDND 420 PGIPLDVALK DSFRTKYHVD YLSYVNAAIR DGCDVRGYFI WSLLDNFEWD DGLSKRFGLY 480 YVDYDHNQTR YAKDSAKWFK EFLRPSLRPN HAKS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 8.0e-115 | 46 | 504 | 466 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-124 | 46 | 503 | 467 | + beta-glucosidase | ||
COG2723 | BglB | 2.0e-137 | 46 | 501 | 466 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 1.0e-153 | 49 | 499 | 457 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-162 | 45 | 504 | 464 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3GNO | 0 | 48 | 504 | 17 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase |
GenBank | EEE58575.1 | 0 | 29 | 504 | 31 | 520 | hypothetical protein OsJ_09895 [Oryza sativa Japonica Group] |
RefSeq | NP_001049358.1 | 0 | 29 | 504 | 31 | 520 | Os03g0212800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_001759779.1 | 0 | 35 | 514 | 1 | 482 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773987.1 | 0 | 12 | 512 | 12 | 517 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 48 | 504 | 17 | 487 | A Chain A, Crystal Structure Of Beta-Methylaspartase From Clostridium Tetanomorphum. Mg-Complex. |
PDB | 3gnp_A | 0 | 48 | 504 | 17 | 487 | A Chain A, Crystal Structure Of Beta-Methylaspartase From Clostridium Tetanomorphum. Mg-Complex. |
PDB | 3gno_A | 0 | 48 | 504 | 17 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 48 | 504 | 20 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 48 | 504 | 20 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |