CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s401_34V6.1
FamilyGT92
Protein PropertiesLength: 684 Molecular Weight: 75364.9 Isoelectric Point: 6.4309
ChromosomeChromosome/Scaffold: 401 Start: 224526 End: 227517
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT923976350
  YAFCGAPMHGTVRADWILHWMKYHHYLTEGSAHFFFYNLGGLANSDRPVFNEFINAGLLSITDILDPNLSWDYPTWYFHQVLLINDCLHRSRFMAERVFF
  FDYDEFLQVPAPDSLKMFMRRHAKEPWISFGSIYANTKDCRLPKPGESETLFERMVWRRPRPECRIQQAKYEGPPVDALHCIGPLGRRKYVANPRKTFAA
  GVHWVTIPKNGLDLSGNGAHILHYRSAPLPKTRLCSNNV
Full Sequence
Protein Sequence     Length: 684     Download
MKRLAKHSTV QGVVFSLLFA IVLLISLSVL LNRISFGVSS NQGFNLAEVF SGSPAINASV    60
PGAAPSLDSG GDALEIPDTD AVITSEEFGN FSSTAPVVNS PSPRDPVSNR TRTHSRSSHL    120
VPAKSPAPVE ANDDDSVEAA NGEIRDNRSE GEGPKGQVGT FFDPEVRNPP PIGPESGLDG    180
PVVDGPDEDG VSRLEPSELT KIPPELSPLP GYSGDVTVNS SPIAISSSTN GVSNQTPVLN    240
RGDARQQRMF QPAGLPHYSF VKFSAYRQSL RTFFVNGISS YVARSFDKDK VAHTCEWHPG    300
NGSLPLSMHT DPGAFVETTA EHIYMKSDEN RGTYSPTIIN CTFKVPVGAN RLGGLLVLRI    360
STGYDRWEKN LPILALEEQV NEVNIVSTPP EKIPFKYAFC GAPMHGTVRA DWILHWMKYH    420
HYLTEGSAHF FFYNLGGLAN SDRPVFNEFI NAGLLSITDI LDPNLSWDYP TWYFHQVLLI    480
NDCLHRSRFM AERVFFFDYD EFLQVPAPDS LKMFMRRHAK EPWISFGSIY ANTKDCRLPK    540
PGESETLFER MVWRRPRPEC RIQQAKYEGP PVDALHCIGP LGRRKYVANP RKTFAAGVHW    600
VTIPKNGLDL SGNGAHILHY RSAPLPKTRL CSNNVTMDGT DDDGEASVLE DGWIQDDQVS    660
QIFKRAKSYP IVPFIRNAAA GGF* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam01697Glyco_transf_924.0e-18396622246+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEAZ37686.13e-3121359981443hypothetical protein OsJ_22025 [Oryza sativa Japonica Group]
RefSeqXP_001758982.12e-322606364348predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001784337.1016831683predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_002263686.11e-34247650117499PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002533995.11e-31247650116493conserved hypothetical protein [Ricinus communis]
Transmembrane Domains
StartEnd
1234
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FC4272322823506310
FC3877922054396430
BJ9585942074786840
BJ5998621884976840
BJ5983161735126840
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1
Pp1s32_144V6.1Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1
Pp1s25_268V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)