Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s408_24V6.1 |
Family | AA5 |
Protein Properties | Length: 559 Molecular Weight: 62297.4 Isoelectric Point: 7.5777 |
Chromosome | Chromosome/Scaffold: 408 Start: 203278 End: 205144 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 34 | 555 | 0 |
AYNGKWRVLTANAGIASMHTAVNFYDSVIFLDRTNIGLSEINFTNGYCRNNPQDRVLKHDCSAHSVMLDPVSGKVRPLTIITDTWCSSGQFFANGTLVQT GGDFDGMRKVRLLDPCGPDGGCDWMESDTENLKDKRWYSTNQLLPDGRQIVVGGIESYSYEFVPKRKSREGSYELNFLNETKDAQNDNLYPFVHLLPDGN LFIFANRDAILLDYRRHKVLRKYPTIPGEPRNYPSAGSSVMLPLRHDDDFTVAEVLVCGGAHNGANSKSKGRDSPASETCGRIVATSSDDPQWVMETMPI RRVMGDMVILPTADVLIINGAQNGSQGWNKATNPAYSPVTYSPDNAKARFHVLKATTIARMYHSTANLLSDGRIIVAGSNTHQYYTFSGDFPTELRVEAF DPPYLDPSYEDIRPSIFNLTTKRIRYSLTFTAVFTVVNRTGDFELNLLSSPFTTHSFSQGQRMLKLNITEPVELGRRGMYQTTVTAPPNSIVAPESHYLL WPIQRKVAGKGVWVQIHSSDST |
Full Sequence |
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Protein Sequence Length: 559 Download |
MRVAASSSCF STILRFWTVN LLFLLKLDVA TVNAYNGKWR VLTANAGIAS MHTAVNFYDS 60 VIFLDRTNIG LSEINFTNGY CRNNPQDRVL KHDCSAHSVM LDPVSGKVRP LTIITDTWCS 120 SGQFFANGTL VQTGGDFDGM RKVRLLDPCG PDGGCDWMES DTENLKDKRW YSTNQLLPDG 180 RQIVVGGIES YSYEFVPKRK SREGSYELNF LNETKDAQND NLYPFVHLLP DGNLFIFANR 240 DAILLDYRRH KVLRKYPTIP GEPRNYPSAG SSVMLPLRHD DDFTVAEVLV CGGAHNGANS 300 KSKGRDSPAS ETCGRIVATS SDDPQWVMET MPIRRVMGDM VILPTADVLI INGAQNGSQG 360 WNKATNPAYS PVTYSPDNAK ARFHVLKATT IARMYHSTAN LLSDGRIIVA GSNTHQYYTF 420 SGDFPTELRV EAFDPPYLDP SYEDIRPSIF NLTTKRIRYS LTFTAVFTVV NRTGDFELNL 480 LSSPFTTHSF SQGQRMLKLN ITEPVELGRR GMYQTTVTAP PNSIVAPESH YLLWPIQRKV 540 AGKGVWVQIH SSDSTTDQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 6.0e-12 | 446 | 549 | 105 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 5.0e-19 | 446 | 549 | 105 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 4.0e-114 | 51 | 293 | 244 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001757263.1 | 0 | 19 | 550 | 11 | 540 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001774105.1 | 0 | 27 | 548 | 18 | 527 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777189.1 | 0 | 19 | 548 | 12 | 527 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783776.1 | 0 | 22 | 549 | 1 | 524 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784508.1 | 0 | 1 | 558 | 1 | 558 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eib_A | 0.0000001 | 102 | 533 | 208 | 620 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eid_A | 0.0000002 | 102 | 533 | 208 | 620 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2vz3_A | 0.0000002 | 102 | 533 | 208 | 620 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2vz1_A | 0.0000002 | 102 | 533 | 208 | 620 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2jkx_A | 0.0000002 | 102 | 533 | 208 | 620 | A Chain A, Galactose Oxidase W290g Mutant |