CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s410_9V6.1
FamilyGH43
Protein PropertiesLength: 480 Molecular Weight: 54243.8 Isoelectric Point: 8.7146
ChromosomeChromosome/Scaffold: 410 Start: 41084 End: 43566
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431683801.5e-31
  TQTFYWYGENKDGPTYHAGKHGLARVDVLGISCYSSKDLWAWKFEGMALRGERVDKSSDLYFRNVVERPKVIYNARTKNYIMWMHIDNGNYSKAAVGVAI
  STQPEGPFEYMGSKRPHGCDSRDMTIFKDDNGDAYIIYSSLTNSELHIGMLTEDYTDIVERGMKKALVSQHREAPAVFKHRNIYYMVTSGCTGWNPNGAL
  VHVAESMLGPWAT
Full Sequence
Protein Sequence     Length: 480     Download
MITMLYRLLK SCNVGNKCRL STLLWSLAAW ILFLHIYNTL FPSGTLLPEP RNPWSKGMDI    60
YADLEVYQRV HKSDRTADVG TKHPPRKKGR FPITIPFKNK GGDRIEEARE QAALQKLAVL    120
FPGRKYAIDP SKTSSGNVGY FYPGRQWRDT DGKTIQAHGG GILYVEGTQT FYWYGENKDG    180
PTYHAGKHGL ARVDVLGISC YSSKDLWAWK FEGMALRGER VDKSSDLYFR NVVERPKVIY    240
NARTKNYIMW MHIDNGNYSK AAVGVAISTQ PEGPFEYMGS KRPHGCDSRD MTIFKDDNGD    300
AYIIYSSLTN SELHIGMLTE DYTDIVERGM KKALVSQHRE APAVFKHRNI YYMVTSGCTG    360
WNPNGALVHV AESMLGPWAT LGDPCIGGED EEFRSHTFFS QGSFVLPLPG LTDSFLFMAD    420
RWRPANLADS RYVWLVLTMG ASAVPIDDAE FSFKFPQCKQ VQIPWAEKWK LPEDWKGSA*    480

Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_22.0e-10161378238+
cd08990GH43_AXH_like1.0e-14200378195+
cd09004GH43_bXyl3.0e-17199383193+
cd08978GH_F4.0e-34170437278+
cd08985GH43_69.0e-123155439286+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_001066630.108447876466Os12g0406100 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_001755081.109747815394predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001784566.10584791422predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_002468324.108447877467hypothetical protein SORBIDRAFT_01g043810 [Sorghum bicolor]
RefSeqXP_002525277.101247746497beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F013943940330A Chain A, 2.35 Angstrom Crystal Structure Of Conserved Hypothetical Protein From Toxoplasma Gondii Me49.
PDB3vt2_E013943940330A Chain A, 2.35 Angstrom Crystal Structure Of Conserved Hypothetical Protein From Toxoplasma Gondii Me49.
PDB3vt2_D013943940330A Chain A, 2.35 Angstrom Crystal Structure Of Conserved Hypothetical Protein From Toxoplasma Gondii Me49.
PDB3vt2_C013943940330A Chain A, 2.35 Angstrom Crystal Structure Of Conserved Hypothetical Protein From Toxoplasma Gondii Me49.
PDB3vt2_B013943940330A Chain A, 2.35 Angstrom Crystal Structure Of Conserved Hypothetical Protein From Toxoplasma Gondii Me49.
Transmembrane Domains
StartEnd
2037
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FC4495222581283850
FC35682824212420
GT7395993001404390
GO8561533371414760
FC4495211932884800
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny