Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s429_16V6.1 |
Family | GH5 |
Protein Properties | Length: 434 Molecular Weight: 48557 Isoelectric Point: 6.3408 |
Chromosome | Chromosome/Scaffold: 429 Start: 136189 End: 138522 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 22 | 346 | 2.3e-34 |
DGHPFYANGWNSYWLMVTASEGSTRSSVDTILRDGASLGLTVCRTWAFNDDTYQALQMSPGRYDEKVFQALDYVIHQARCNGVRLLLSFVNNWKDYGGKP KYVEWARAAGENTTSDDAFFRNSKCRQFYRDHVKAVLTRVNTINQVEYRNDPTIFGWELMNEPQCPSDSSGHALKAWIEEMAAYVKSLDNNHLLTVGSEG FYASNSEGWSSANPNSYAGTIGTDFIRDHRVTGIDFATVHAYPDSWLGTDNVDEKLEFFNRWVRAHIEDAERVLRMPVLFTEFGLSDKKSGFCEEKRDAF YSIVYDQVYQSAQNQGAAAGALQWQ |
Full Sequence |
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Protein Sequence Length: 434 Download |
MAGSGIAAWN FVTRVGSQLV LDGHPFYANG WNSYWLMVTA SEGSTRSSVD TILRDGASLG 60 LTVCRTWAFN DDTYQALQMS PGRYDEKVFQ ALDYVIHQAR CNGVRLLLSF VNNWKDYGGK 120 PKYVEWARAA GENTTSDDAF FRNSKCRQFY RDHVKAVLTR VNTINQVEYR NDPTIFGWEL 180 MNEPQCPSDS SGHALKAWIE EMAAYVKSLD NNHLLTVGSE GFYASNSEGW SSANPNSYAG 240 TIGTDFIRDH RVTGIDFATV HAYPDSWLGT DNVDEKLEFF NRWVRAHIED AERVLRMPVL 300 FTEFGLSDKK SGFCEEKRDA FYSIVYDQVY QSAQNQGAAA GALQWQLLPP AMCDWNDGYG 360 CDPGCGSGIC NLMANQSARL KFISSTPGHC HNESDMDLHG MFGRRNHGDN STSSPHRHSI 420 SNVIKSGLRH IFK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 1.0e-6 | 171 | 325 | 164 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 9.0e-23 | 83 | 308 | 226 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001756671.1 | 0 | 11 | 379 | 2 | 366 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001760262.1 | 0 | 6 | 432 | 3 | 419 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762204.1 | 0 | 6 | 377 | 1 | 372 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001774665.1 | 0 | 11 | 391 | 47 | 423 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784893.1 | 0 | 1 | 433 | 1 | 433 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 10 | 384 | 5 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 20 | 347 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 20 | 347 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 20 | 347 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 20 | 347 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC434041 | 291 | 93 | 383 | 0 |
JK987915 | 292 | 8 | 299 | 0 |
BY946914 | 233 | 3 | 235 | 0 |
DC911284 | 228 | 6 | 233 | 0 |
DT747977 | 292 | 12 | 303 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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