| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s448_1V6.1 |
| Family | GH63 |
| Protein Properties | Length: 476 Molecular Weight: 53283.6 Isoelectric Point: 4.9154 |
| Chromosome | Chromosome/Scaffold: 448 Start: 13962 End: 16699 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH63 | 32 | 465 | 0 |
| HTIKRTDAIDEQQTEAYKKLEVLLTYSRQILTENDLGGYTIPAKGLYPYQWNWDSALVAMGWATFDEARAWEEMTKLFSAQWDDGMVSHIVFHKPSTTYF PGPEIWGSVEKPRKSTGITQPPVAAITVHKLYEQAVNKELALTKVRELFPKLLAWHRWFKTARDPENTGLVATLHPWESGMDNSPAWDEPLRNVPVDDIP PYVRADLTHVNSSMRPSQAEYDRFLTLVYRFRAVDYDCKQLYYLSPFRVTDLCTNSVLYRANLSLRWLAEMLGELDVVPEIDEWLEGFRVAFSSLYDPAV KMFKSKDQLTGKLLNASTSAGFLPLFARIATPSQAQELAATLEQWLSCVKYGIPSNDPNSADFEPLRYWRGPIWAIVNWMITDGLLAYGYDALAQRVESD TYELLGSGICEYYDPTDGKPAGGGSFSWTAAMCL | |||
| Full Sequence |
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| Protein Sequence Length: 476 Download |
| MAPVAMMSTV PATDASTRPG CGGALTPAVL VHTIKRTDAI DEQQTEAYKK LEVLLTYSRQ 60 ILTENDLGGY TIPAKGLYPY QWNWDSALVA MGWATFDEAR AWEEMTKLFS AQWDDGMVSH 120 IVFHKPSTTY FPGPEIWGSV EKPRKSTGIT QPPVAAITVH KLYEQAVNKE LALTKVRELF 180 PKLLAWHRWF KTARDPENTG LVATLHPWES GMDNSPAWDE PLRNVPVDDI PPYVRADLTH 240 VNSSMRPSQA EYDRFLTLVY RFRAVDYDCK QLYYLSPFRV TDLCTNSVLY RANLSLRWLA 300 EMLGELDVVP EIDEWLEGFR VAFSSLYDPA VKMFKSKDQL TGKLLNASTS AGFLPLFARI 360 ATPSQAQELA ATLEQWLSCV KYGIPSNDPN SADFEPLRYW RGPIWAIVNW MITDGLLAYG 420 YDALAQRVES DTYELLGSGI CEYYDPTDGK PAGGGSFSWT AAMCLAWLGK CATSA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10137 | PRK10137 | 6.0e-5 | 82 | 207 | 144 | + alpha-glucosidase; Provisional | ||
| pfam03200 | Glyco_hydro_63 | 5.0e-5 | 164 | 461 | 345 | + Mannosyl oligosaccharide glucosidase. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63. They catalyze the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase EC:3.2.1.106 is the first enzyme in the N-linked oligosaccharide processing pathway. | ||
| pfam01204 | Trehalase | 3.0e-6 | 274 | 471 | 223 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| PRK10137 | PRK10137 | 1.0e-6 | 286 | 462 | 199 | + alpha-glucosidase; Provisional | ||
| COG3408 | GDB1 | 3.0e-8 | 285 | 463 | 189 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001761811.1 | 0 | 12 | 475 | 51 | 516 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772747.1 | 0 | 1 | 475 | 1 | 477 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001785177.1 | 0 | 25 | 475 | 18 | 468 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | YP_004589.1 | 0 | 60 | 467 | 5 | 413 | hypothetical protein TTC0614 [Thermus thermophilus HB27] |
| RefSeq | YP_144244.1 | 0 | 54 | 467 | 4 | 418 | hypothetical protein TTHA0978 [Thermus thermophilus HB8] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2z07_B | 0 | 54 | 467 | 4 | 418 | A Chain A, Crystal Structure Of Uncharacterized Conserved Protein From Thermus Thermophilus Hb8 |
| PDB | 2z07_A | 0 | 54 | 467 | 4 | 418 | A Chain A, Crystal Structure Of Uncharacterized Conserved Protein From Thermus Thermophilus Hb8 |
| PDB | 4j5t_A | 0.0002 | 34 | 470 | 351 | 802 | A Chain A, Crystal Structure Of Processing Alpha-glucosidase I |
| PDB | 3w7u_B | 0.001 | 352 | 462 | 631 | 747 | A Chain A, Crystal Structure Of Processing Alpha-glucosidase I |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FC358017 | 271 | 116 | 386 | 0 |
| FC350475 | 261 | 106 | 366 | 0 |
| BJ974902 | 242 | 235 | 476 | 0 |
| DC936612 | 258 | 189 | 446 | 0 |
| FC361299 | 229 | 87 | 315 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre10.g447550.t1.3 | ||||
| Physcomitrella patens | Pp1s154_32V6.1 | Pp1s51_76V6.1 | |||
| Selaginella moellendorffii | 437793 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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