| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s44_194V6.1 |
| Family | GH3 |
| Protein Properties | Length: 425 Molecular Weight: 46524.4 Isoelectric Point: 6.8371 |
| Chromosome | Chromosome/Scaffold: 44 Start: 1253587 End: 1255994 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH3 | 103 | 329 | 0 |
| NRPLLIMVDQEGGYVQRFGPPFTVIPHARIVGDTSDPEAAGAIASVIAKELRAVNVDMNLAPVLDVDTNPENTVIGKRSFATTPARVANLGFAYIRGLQC EGVAACAKHYPGHGDTTLDSHVDLPLLPHSLTRLVEIEMSPFAKAVDADVAAVMVAHIDVPCFSGRTESARKPATMCVDTIAYLRDALLFEGVIISDCME TGAIVKEHRIEEAAVQAVLAGIDMVLV | |||
| Full Sequence |
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| Protein Sequence Length: 425 Download |
| MDGLNDNVSS YLKNPLPVFY SSLPSHDETD QKVEKSFRAD QVAKIRAAVA ELLVFGFSGT 60 SMNHHARRLI TMGAGGVILF NRNFKDPEQV ARLCADLKRE AGNRPLLIMV DQEGGYVQRF 120 GPPFTVIPHA RIVGDTSDPE AAGAIASVIA KELRAVNVDM NLAPVLDVDT NPENTVIGKR 180 SFATTPARVA NLGFAYIRGL QCEGVAACAK HYPGHGDTTL DSHVDLPLLP HSLTRLVEIE 240 MSPFAKAVDA DVAAVMVAHI DVPCFSGRTE SARKPATMCV DTIAYLRDAL LFEGVIISDC 300 METGAIVKEH RIEEAAVQAV LAGIDMVLVS HTLSRQIAVV DALVQAVLTE RIPYRRVMDA 360 VSRIFTLKQT YVRSSFQDWI EKGLREFEIQ QIGCKEHHDI VANIVYQSAA IRGEATTIPR 420 RKRR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-48 | 105 | 367 | 264 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK05337 | PRK05337 | 3.0e-61 | 75 | 370 | 307 | + beta-hexosaminidase; Provisional | ||
| COG1472 | BglX | 5.0e-77 | 56 | 395 | 342 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEH56360.1 | 0 | 42 | 372 | 7 | 346 | glycoside hydrolase family 3 protein [Micromonas pusilla CCMP1545] |
| RefSeq | NP_621912.1 | 0 | 45 | 423 | 9 | 385 | Beta-glucosidase-related glycosidase [Thermoanaerobacter tengcongensis MB4] |
| RefSeq | XP_001760692.1 | 0 | 1 | 424 | 1 | 433 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | YP_003476089.1 | 0 | 45 | 424 | 8 | 385 | glycoside hydrolase family 3 domain protein [Thermoanaerobacter italicus Ab9] |
| RefSeq | ZP_05380021.1 | 0 | 45 | 371 | 9 | 336 | glycoside hydrolase family 3 domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3nvd_B | 0 | 60 | 368 | 71 | 393 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3nvd_A | 0 | 60 | 368 | 71 | 393 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3bmx_B | 0 | 60 | 368 | 71 | 393 | A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis |
| PDB | 3bmx_A | 0 | 60 | 368 | 71 | 393 | A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis |
| PDB | 3lk6_D | 0 | 60 | 368 | 45 | 367 | A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | RXN-12625 | EC-3.2.1.52 | β-L-N-acetylhexosaminidase |
| chitin degradation II | RXN-12626 | EC-3.2.1.52 | β-L-N-acetylhexosaminidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FC387567 | 283 | 131 | 413 | 0 |
| FC326247 | 236 | 190 | 425 | 0 |
| FC363228 | 196 | 230 | 425 | 0 |
| FC387566 | 196 | 230 | 425 | 0 |
| FC326246 | 196 | 230 | 425 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Physcomitrella patens | Pp1s8830_1V6.1 | ||||
| Picea abies | MA_158781g0150 | ||||
| Ricinus communis | 31686.m000027 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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