CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s46_165V6.1
FamilyGT77
Protein PropertiesLength: 637 Molecular Weight: 72369.1 Isoelectric Point: 7.4388
ChromosomeChromosome/Scaffold: 46 Start: 1299257 End: 1304543
Descriptionxyloglucanase 113
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT771533760
  VTNILVGAMDTKILEALFWKGVPVFDMRSGMETVDVGWGTPKFHKMGREKVILINAFLAEGYEILMCDTDVVFLQDPFPYFERFPDADILTSSDEVVNSV
  DDDRLEFYGQSWGAYNIGIFFWRPTTIAKELAKEWLQLLLSDDKIWDQNGFNDLARNVTGPSVGHDSLFWAYRGNLKMGILPVSLFCSGHTYFIQELYKK
  LDLVPYAVHTTFQFGGTEGKRHRL
Full Sequence
Protein Sequence     Length: 637     Download
MKPVTLCVQF SAVLVVLFLS FYLGRPIYLE SFANTQDATS QPTSGLISGF REWRNGGGST    60
SGEQNETRSQ KPGRRSKPGR NDETNFGLHP ALRQPIWEVP PAGSQLPPRD AFALTKEMIE    120
FRAKKNVIAV TFANFAFMDF VLNWVRHLTD VEVTNILVGA MDTKILEALF WKGVPVFDMR    180
SGMETVDVGW GTPKFHKMGR EKVILINAFL AEGYEILMCD TDVVFLQDPF PYFERFPDAD    240
ILTSSDEVVN SVDDDRLEFY GQSWGAYNIG IFFWRPTTIA KELAKEWLQL LLSDDKIWDQ    300
NGFNDLARNV TGPSVGHDSL FWAYRGNLKM GILPVSLFCS GHTYFIQELY KKLDLVPYAV    360
HTTFQFGGTE GKRHRLREAK LFHDPPEYFD TPGGYIWFKI SIPQSLLSGG LHTVESHFAL    420
VNHQLIQIRT ALAVASVLNR TLIMPPIWAR FDRIWYGHPG ILTGTKTSQP LKVPLDHVFE    480
VNRMVADLSE IEFGPQIGIR EYSFLENPLL ENKVKKSVLK VKLCDRKLAG CSHKNKVSSG    540
VLKLPKNSTD EELSAKLDIF NKFKILEFTS AIDVFGGFRN IDRGMKFTRR IKSYTGIWCC    600
VMDKTPGHIW YDIYWDEKPN WKPLPPATPA DDHQPE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam03407Nucleotid_trans4.0e-40153376230+
Gene Ontology
GO TermDescription
GO:0005783endoplasmic reticulum
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAH19600.1096635102643AT2G35610 [Arabidopsis thaliana]
EMBLCBI29197.109463599641unnamed protein product [Vitis vinifera]
RefSeqNP_850250.1096635102643unknown protein [Arabidopsis thaliana]
RefSeqXP_001761094.101066361526predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_002519934.10263515638reticulon3-A3, putative [Ricinus communis]
Transmembrane Domains
StartEnd
729
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GR7084012981394350
DT5119932991274240
EX1308722941964880
EV2351133011914900
DT5670462851494320
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00317.5Aquca_011_00317.4Aquca_011_00317.3Aquca_011_00317.2Aquca_011_00317.1
Arabidopsis lyrata902666
Arabidopsis thalianaAT2G35610.1
Brachypodium distachyonBradi1g15410.1Bradi3g45950.1
Brassica rapaBra017310Bra005325
Carica papayaevm.model.supercontig_90.39
Capsella rubellaCarubv10022808m
Chlamydomonas reinhardtiig13982.t1g15149.t1Cre02.g082950.t1.3Cre01.g000400.t1.2Cre01.g000450.t1.2
g4580.t1Cre07.g340950.t1.3Cre04.g224350.t1.3Cre01.g000500.t1.3Cre09.g416650.t1.2
Cre13.g574100.t1.2Cre13.g574041.t1.1Cre13.g574050.t1.2Cre07.g332500.t1.2
Citrus clementinaCiclev10011269m
Citrus sinensisorange1.1g036925m
Cucumis sativusCucsa.018320.1Cucsa.018320.10Cucsa.018320.3
Eucalyptus grandisEucgr.E01147.2Eucgr.E01147.1
Fragaria vescamrna10921.1-v1.0-hybrid
Glycine maxGlyma11g09650.2Glyma01g35690.1Glyma16g08350.1Glyma16g20730.1Glyma16g08350.3
Glyma16g08350.2
Gossypium raimondiiGorai.004G177500.4Gorai.008G219000.2Gorai.004G177500.5Gorai.004G177500.6Gorai.004G177500.7
Gorai.004G177500.9Gorai.004G177500.2Gorai.004G177500.3Gorai.004G177500.1Gorai.008G219000.1
Gorai.004G177500.8
Linum usitatissimumLus10005034Lus10027804
Malus domesticaMDP0000349223
Manihot esculentacassava4.1_003398mcassava4.1_008884m
Medicago truncatulaMedtr8g072310.1Medtr5g025590.1
Mimulus guttatusmgv1a002766m
Oryza sativaLOC_Os03g38930.1
Panicum virgatumPavirv00057126mPavirv00045617mPavirv00069114m
Phaseolus vulgarisPhvul.003G278500.1Phvul.002G122000.1
Picea abiesMA_486176g0010MA_10433213g0010
Populus trichocarpaPotri.004G235800.1Potri.004G235800.2
Prunus persicappa002815m
Ricinus communis29827.m002651
Setaria italicaSi034728m
Selaginella moellendorffii127789
Sorghum bicolorSb01g015590.1
Thellungiella halophilaThhalv10016368m
Vitis viniferaGSVIVT01036881001
Volvox carteriVocar20007251mVocar20009385mVocar20010418mVocar20002020mVocar20004159m
Vocar20001219mVocar20001335mVocar20001723mVocar20006862mVocar20009663m
Vocar20008350mVocar20001348m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)