Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s475_5V6.4 |
Family | AA6 |
Protein Properties | Length: 305 Molecular Weight: 31217.4 Isoelectric Point: 7.1628 |
Chromosome | Chromosome/Scaffold: 475 Start: 54930 End: 57989 |
Description | Quinone reductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 105 | 299 | 0 |
KVFIVFYSMYGHVLTLAKKMKEGVDSVEGVEAILYQVPETLPADVLTKMSAPPKDEAIPVITAAQLPEADAFLFGIPTRYGTMSAQMKAFFDSTGGLWRG QSLAGKPAGIFVSTGTQGGGQETTALTTITQLTHHGMLYVPIGYTFGAGMFKLDEPRGGSPYGAGTFAGDGTRMPTETELAMAEHQGRLTANVAK |
Full Sequence |
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Protein Sequence Length: 305 Download |
MGKGTGCFPS KGSKSVGAGS GTPHEKVETG PTSDAPVSAS NSPLATPPPA AAPSATPDAA 60 KSPAPTADST ERSVASEALE KSADDKHSVK APISSAAPIS SGKVKVFIVF YSMYGHVLTL 120 AKKMKEGVDS VEGVEAILYQ VPETLPADVL TKMSAPPKDE AIPVITAAQL PEADAFLFGI 180 PTRYGTMSAQ MKAFFDSTGG LWRGQSLAGK PAGIFVSTGT QGGGQETTAL TTITQLTHHG 240 MLYVPIGYTF GAGMFKLDEP RGGSPYGAGT FAGDGTRMPT ETELAMAEHQ GRLTANVAKL 300 LARK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 2.0e-7 | 108 | 217 | 121 | + Flavodoxin. | ||
pfam03358 | FMN_red | 5.0e-10 | 116 | 248 | 133 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 9.0e-32 | 104 | 303 | 206 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 9.0e-56 | 104 | 301 | 199 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 4.0e-68 | 104 | 303 | 201 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM64959.1 | 0 | 1 | 303 | 1 | 272 | minor allergen [Arabidopsis thaliana] |
GenBank | ABR16990.1 | 0 | 1 | 303 | 1 | 271 | unknown [Picea sitchensis] |
RefSeq | NP_195393.1 | 0 | 1 | 303 | 1 | 272 | quinone reductase family protein [Arabidopsis thaliana] |
RefSeq | XP_001785483.1 | 0 | 1 | 304 | 1 | 304 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002310794.1 | 0 | 1 | 303 | 1 | 253 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 0 | 105 | 301 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 0 | 105 | 301 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 0 | 105 | 301 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 0 | 105 | 301 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 0 | 105 | 301 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BY946987 | 273 | 1 | 273 | 0 |
DC939759 | 219 | 71 | 289 | 0 |
DC926913 | 204 | 102 | 305 | 0 |
DC956631 | 204 | 102 | 305 | 0 |
DC928056 | 195 | 111 | 305 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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