Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s49_195V6.1 |
Family | GH3 |
Protein Properties | Length: 614 Molecular Weight: 67353.6 Isoelectric Point: 9.2931 |
Chromosome | Chromosome/Scaffold: 49 Start: 1601522 End: 1604702 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 94 | 328 | 0 |
LKTRLSIPEIYGIDAVHGHNTVYGATVFPHNVGLGCTRDPALIEKIGVVTALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPDVVSSMTSIIDGLQ GKKPHGWDGPYVQKSTRKVAACAKHFVGDGGTTNGTDEGNTEVSYKELVDIHMKAYPHAIARGVATIMASYNSWNGFKMHANKFLLTDVLKGQLGFKGFI ISDWQGIDRISTPWGVNYTYSTELALNAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 614 Download |
MMFPEAAAHK DGKHELYKDP KQTVAVRVKD LLGRMTLDEK LGQMTQIEMT IANTSVVTKY 60 YIGSILSGGG SSPGPKATVK QWTNMTDYFQ SGALKTRLSI PEIYGIDAVH GHNTVYGATV 120 FPHNVGLGCT RDPALIEKIG VVTALEVRAT GIPYVFAPCI AVCRDPRWGR CYESYSEDPD 180 VVSSMTSIID GLQGKKPHGW DGPYVQKSTR KVAACAKHFV GDGGTTNGTD EGNTEVSYKE 240 LVDIHMKAYP HAIARGVATI MASYNSWNGF KMHANKFLLT DVLKGQLGFK GFIISDWQGI 300 DRISTPWGVN YTYSTELALN AGIDMVMVPY NYTGFITVAK QLIAEKKVPM SRIDDAVSRI 360 LRVKFQMGLF EKPFADKSLS KLMGTSSHRK LARQAVRKSL VLLKNGKSSK PLLPLNKYAR 420 KILVAGAHAN DIGLQCGGWT ISWQGMPGNI TKGTTILEGI KQTVDSNTKV VYKANPKKGD 480 AKEKGYQYAI IVVGEQPYAE FEGDNLNLTL PAPYPNMIKD TCYHVQCVVV IISGRPLVIE 540 PYVSDIDALV AAWLPGTEGT GIADVLFGKY DFQGKLSRTW FKRVDQLPMN VGDKDYDPLY 600 PFGFGLKMGV SHD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-43 | 114 | 606 | 552 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 9.0e-51 | 400 | 606 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-75 | 4 | 606 | 672 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-87 | 35 | 441 | 414 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-87 | 36 | 363 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001130296.1 | 0 | 17 | 606 | 27 | 616 | exoglucanase1 [Zea mays] |
RefSeq | XP_001761531.1 | 0 | 1 | 613 | 1 | 613 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777176.1 | 0 | 5 | 610 | 25 | 630 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781708.1 | 0 | 17 | 612 | 29 | 625 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001786487.1 | 0 | 5 | 611 | 22 | 628 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 16 | 606 | 4 | 597 | A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, 5 Structures |
PDB | 1x38_A | 0 | 16 | 606 | 4 | 597 | A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, 5 Structures |
PDB | 1lq2_A | 0 | 16 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 16 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 16 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC368927 | 268 | 191 | 458 | 0 |
HO784016 | 404 | 76 | 476 | 0 |
FC345502 | 199 | 416 | 614 | 0 |
DW500162 | 317 | 286 | 600 | 0 |
HO784016 | 45 | 17 | 61 | 0.000006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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