Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s512_4V6.1 |
Family | GT47 |
Protein Properties | Length: 583 Molecular Weight: 65336.1 Isoelectric Point: 6.3252 |
Chromosome | Chromosome/Scaffold: 512 Start: 46201 End: 48816 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 177 | 524 | 0 |
CDGRRVYIYELAAEFNELILRNCTGVEAWYSMCDDIINQGFGVPLQIPESDPMASILQPPSAWFRTDQFTIEITFHERLKIHPCRTTNTEEASLFYIPFY HGIDLIKNLYNTDFVARDRLTLLFIKWLRSQKPWQRYQGKRHVLVLGRIVWDFIRDYSKDKTWGSSLLTHPELTNVTKLLIERDIWKDDTLGVPYPTSFH PSSESDLRAWQRTVRTFKRHKFVSLAGATRDNKLTGLIRDAVFEQCANSSRCHSIACNDGWCKRNPQVIVQMGLESVFCLQPPGDSPTRKGIFDSLQTGC IPVVFNRQQAALQYLSHLPGNHSDYSVIVSEEDVCDHNYDIMNHLSRI |
Full Sequence |
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Protein Sequence Length: 583 Download |
MANSRVNISS CLQSLNCLRL LEELQVTMRS SPLKGGRRHF KPKVSIGRWT ILALFTLSMV 60 FLYLMVGDGW RAVGENSDTG SEVTLPGEQE GFGPISTWIQ SNDQEGLSPT PAVSQSGDQE 120 QFSPTPIVSQ FGDQEGSFVV VPTPTASIEN SSISQTDSSA APSVEAISPT LRSSDKCDGR 180 RVYIYELAAE FNELILRNCT GVEAWYSMCD DIINQGFGVP LQIPESDPMA SILQPPSAWF 240 RTDQFTIEIT FHERLKIHPC RTTNTEEASL FYIPFYHGID LIKNLYNTDF VARDRLTLLF 300 IKWLRSQKPW QRYQGKRHVL VLGRIVWDFI RDYSKDKTWG SSLLTHPELT NVTKLLIERD 360 IWKDDTLGVP YPTSFHPSSE SDLRAWQRTV RTFKRHKFVS LAGATRDNKL TGLIRDAVFE 420 QCANSSRCHS IACNDGWCKR NPQVIVQMGL ESVFCLQPPG DSPTRKGIFD SLQTGCIPVV 480 FNRQQAALQY LSHLPGNHSD YSVIVSEEDV CDHNYDIMNH LSRIPLAEVA RMQANVVNLI 540 PRLLYRNTKL TGDYTSMDAI DVAMGSLLTS FDAEKPIAGA SS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-49 | 176 | 510 | 351 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001752322.1 | 0 | 134 | 579 | 83 | 525 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001755886.1 | 0 | 175 | 568 | 1 | 394 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001766126.1 | 0 | 177 | 567 | 1 | 378 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001785740.1 | 0 | 177 | 568 | 1 | 392 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002269913.1 | 0 | 138 | 568 | 107 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |