| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s51_278V6.1 |
| Family | GT19 |
| Protein Properties | Length: 418 Molecular Weight: 46181.4 Isoelectric Point: 7.1892 |
| Chromosome | Chromosome/Scaffold: 51 Start: 1669732 End: 1673510 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT19 | 3 | 367 | 0 |
| SLRRLSPKPLRFAGVGGANMEKEGLDSVFKMEDITVMGAAELFPHMFRIWRRLRQTVAEAVDFEPHVVVTVDAKGFSFRVLRSLTAIYEKKKEQPPFLVH YVAPSYWAWKGGDARLDSMKEFVDHLLCILPFEAPMCKAHGLGATFVGHPVLEDAYMNVPSAEHSAPRNWEIQGFGTNFREKHGVQSGTKIISVLPGSRV QEVKRMLPLFRIAMHRLAEDYPHIKAVVPTAQSSVVTNMVQESVSRWEIPAIVVPAASDLEKYDAFAASDAGLCTSGTASMQLLLARVPSVVAYRANPIT EWLIKSRTKLEYISLPNILLNSPVVPEALFGECTPERLASLLKQVLEDHQMQELQRTSADQVLSM | |||
| Full Sequence |
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| Protein Sequence Length: 418 Download |
| MGSLRRLSPK PLRFAGVGGA NMEKEGLDSV FKMEDITVMG AAELFPHMFR IWRRLRQTVA 60 EAVDFEPHVV VTVDAKGFSF RVLRSLTAIY EKKKEQPPFL VHYVAPSYWA WKGGDARLDS 120 MKEFVDHLLC ILPFEAPMCK AHGLGATFVG HPVLEDAYMN VPSAEHSAPR NWEIQGFGTN 180 FREKHGVQSG TKIISVLPGS RVQEVKRMLP LFRIAMHRLA EDYPHIKAVV PTAQSSVVTN 240 MVQESVSRWE IPAIVVPAAS DLEKYDAFAA SDAGLCTSGT ASMQLLLARV PSVVAYRANP 300 ITEWLIKSRT KLEYISLPNI LLNSPVVPEA LFGECTPERL ASLLKQVLED HQMQELQRTS 360 ADQVLSMLSP PSSSLLHSSG ALLIEDEHSE KPSMAAAATI LEFFGLMNSP KKSPISY* 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 2.0e-32 | 12 | 364 | 362 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 8.0e-56 | 2 | 350 | 356 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 4.0e-70 | 12 | 357 | 352 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 4.0e-95 | 1 | 355 | 357 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 3.0e-97 | 1 | 358 | 358 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 1 | 403 | 27 | 428 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_178535.2 | 0 | 1 | 403 | 59 | 452 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_001761865.1 | 0 | 1 | 336 | 69 | 403 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761948.1 | 0 | 1 | 371 | 28 | 397 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002528957.1 | 0 | 1 | 401 | 65 | 464 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DC932545 | 245 | 3 | 247 | 0 |
| DC947056 | 158 | 179 | 336 | 0 |
| DC947056 | 73 | 332 | 404 | 0.000000000001 |
| DC947056 | 12 | 403 | 414 | 0.000000000001 |
| DC947056 | 42 | 158 | 199 | 0.1 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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