| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s51_278V6.2 |
| Family | GT19 |
| Protein Properties | Length: 486 Molecular Weight: 53427.6 Isoelectric Point: 7.0039 |
| Chromosome | Chromosome/Scaffold: 51 Start: 1669732 End: 1673510 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 52 | 435 | 0 |
| VFIVAGEPSGDVIGSRLMGSLRRLSPKPLRFAGVGGANMEKEGLDSVFKMEDITVMGAAELFPHMFRIWRRLRQTVAEAVDFEPHVVVTVDAKGFSFRVL RSLTAIYEKKKEQPPFLVHYVAPSYWAWKGGDARLDSMKEFVDHLLCILPFEAPMCKAHGLGATFVGHPVLEDAYMNVPSAEHSAPRNWEIQGFGTNFRE KHGVQSGTKIISVLPGSRVQEVKRMLPLFRIAMHRLAEDYPHIKAVVPTAQSSVVTNMVQESVSRWEIPAIVVPAASDLEKYDAFAASDAGLCTSGTASM QLLLARVPSVVAYRANPITEWLIKSRTKLEYISLPNILLNSPVVPEALFGECTPERLASLLKQVLEDHQMQELQRTSADQVLSM | |||
| Full Sequence |
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| Protein Sequence Length: 486 Download |
| MLRQGLLFVK RSLGGAAEWR ISDAVGQKYP RFASPLSNVA SDAGDSEEDL RVFIVAGEPS 60 GDVIGSRLMG SLRRLSPKPL RFAGVGGANM EKEGLDSVFK MEDITVMGAA ELFPHMFRIW 120 RRLRQTVAEA VDFEPHVVVT VDAKGFSFRV LRSLTAIYEK KKEQPPFLVH YVAPSYWAWK 180 GGDARLDSMK EFVDHLLCIL PFEAPMCKAH GLGATFVGHP VLEDAYMNVP SAEHSAPRNW 240 EIQGFGTNFR EKHGVQSGTK IISVLPGSRV QEVKRMLPLF RIAMHRLAED YPHIKAVVPT 300 AQSSVVTNMV QESVSRWEIP AIVVPAASDL EKYDAFAASD AGLCTSGTAS MQLLLARVPS 360 VVAYRANPIT EWLIKSRTKL EYISLPNILL NSPVVPEALF GECTPERLAS LLKQVLEDHQ 420 MQELQRTSAD QVLSMLSPPS SSLLHSSGAL LIEDEHSEKP SMAAAATILE FFGLMNSPKK 480 SPISY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 6.0e-41 | 53 | 432 | 389 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 3.0e-59 | 52 | 418 | 371 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 4.0e-78 | 52 | 425 | 380 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 2.0e-105 | 50 | 423 | 376 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 4.0e-109 | 50 | 426 | 377 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 43 | 471 | 3 | 428 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_178535.2 | 0 | 27 | 471 | 19 | 452 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_001761865.1 | 0 | 1 | 404 | 1 | 403 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761948.1 | 0 | 42 | 439 | 1 | 397 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002528957.1 | 0 | 31 | 469 | 27 | 464 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DC932545 | 265 | 53 | 315 | 0 |
| DC947056 | 158 | 247 | 404 | 0 |
| DC947056 | 73 | 400 | 472 | 0.000000000001 |
| DC947056 | 12 | 471 | 482 | 0.000000000001 |
| DC947056 | 42 | 226 | 267 | 0.11 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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