| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s51_297V6.1 |
| Family | GT19 |
| Protein Properties | Length: 444 Molecular Weight: 48995.9 Isoelectric Point: 8.951 |
| Chromosome | Chromosome/Scaffold: 51 Start: 1779323 End: 1781711 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 52 | 437 | 0 |
| VFIVVGEPSGDVIGSRLMGSLRRLSPKPLRFAGVGGFGYASRANMEKEGLNSVFKMEYITVMGAAELFPHMFRIWRRLRQTVAEVVDFEPHVVVTVDAKG FSFRVLRSLTSNGYSMISGSDTSRLVLLASIVPVDIPYTRKKTEQPPILVHYLAPSYWAWKMGDARLDSMKEFVDHLLCILPFEAPMYKAHGLGATFVGQ PVLEDPYMNVPSAENSAPRNWEIQGFGTNFREKHGVQSGTKIISVLPGSRVQEVKRMLPLFRIAMHRLAEDYPHIKAVVPTAQSSVVTNMVQESVSRWEI PAIVVPAASDLEKYDAFAASDAGLCTSGTASMQLLLARVPSVVAYRANPITEWLIKSRTKLEYISLSNILLNSPVVPEALFGECTL | |||
| Full Sequence |
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| Protein Sequence Length: 444 Download |
| MLRQGLLFVK RSLGVAAEWR ILDAVGLKYP RFASPLSNVA SDVGDSVEEL RVFIVVGEPS 60 GDVIGSRLMG SLRRLSPKPL RFAGVGGFGY ASRANMEKEG LNSVFKMEYI TVMGAAELFP 120 HMFRIWRRLR QTVAEVVDFE PHVVVTVDAK GFSFRVLRSL TSNGYSMISG SDTSRLVLLA 180 SIVPVDIPYT RKKTEQPPIL VHYLAPSYWA WKMGDARLDS MKEFVDHLLC ILPFEAPMYK 240 AHGLGATFVG QPVLEDPYMN VPSAENSAPR NWEIQGFGTN FREKHGVQSG TKIISVLPGS 300 RVQEVKRMLP LFRIAMHRLA EDYPHIKAVV PTAQSSVVTN MVQESVSRWE IPAIVVPAAS 360 DLEKYDAFAA SDAGLCTSGT ASMQLLLARV PSVVAYRANP ITEWLIKSRT KLEYISLSNI 420 LLNSPVVPEA LFGECTLSDS LLF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 4.0e-30 | 53 | 434 | 389 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 6.0e-49 | 52 | 438 | 391 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 2.0e-67 | 52 | 438 | 393 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 1.0e-92 | 50 | 436 | 389 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 3.0e-93 | 50 | 436 | 387 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC71491.1 | 0 | 49 | 436 | 43 | 395 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_178535.2 | 0 | 49 | 439 | 39 | 389 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_001761865.1 | 0 | 1 | 443 | 1 | 410 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761948.1 | 0 | 42 | 436 | 1 | 362 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002528957.1 | 0 | 49 | 436 | 45 | 399 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DC932545 | 260 | 88 | 347 | 0 |
| DC947056 | 166 | 279 | 444 | 0 |
| BJ940973 | 144 | 1 | 144 | 0 |
| JG864023 | 300 | 140 | 439 | 0 |
| DC947056 | 42 | 258 | 299 | 0.034 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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