| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s52_244V6.2 |
| Family | GH35 |
| Protein Properties | Length: 684 Molecular Weight: 75470.4 Isoelectric Point: 5.104 |
| Chromosome | Chromosome/Scaffold: 52 Start: 1885323 End: 1891074 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 36 | 353 | 0 |
| FLKDGVPFRIIGGDLHYFRVHPLLWEDRLLRAKALGLNAIQTYVPWNLHEPRPGLLNFNGSADLLSFLKLAQELDFLVILRIGPYICAEWDLGGLPAWLL ELKPSVRLRSSDASYLSQVDNWWKELLPKIAPELFSAGGSVIMVQIENEYGSFGIDKLYLQFLQKQVRSHLGNDIIIYTTDGAVEENLSYGSLSDDGVFA AIDFPTGWDPAAAFALQKRFNSPGMSPPFSAEFYTGWLTHWGERLAQTDAKSTAVALDDILRLNASVVLYMVHGGTNFGFWSGANTGAGPSDFQPDITSY DYDAPIGEAGDVTGNKYQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 684 Download |
| MNFKVIMGAV LLLCLWISVG AQSSSKHSFV IENNLFLKDG VPFRIIGGDL HYFRVHPLLW 60 EDRLLRAKAL GLNAIQTYVP WNLHEPRPGL LNFNGSADLL SFLKLAQELD FLVILRIGPY 120 ICAEWDLGGL PAWLLELKPS VRLRSSDASY LSQVDNWWKE LLPKIAPELF SAGGSVIMVQ 180 IENEYGSFGI DKLYLQFLQK QVRSHLGNDI IIYTTDGAVE ENLSYGSLSD DGVFAAIDFP 240 TGWDPAAAFA LQKRFNSPGM SPPFSAEFYT GWLTHWGERL AQTDAKSTAV ALDDILRLNA 300 SVVLYMVHGG TNFGFWSGAN TGAGPSDFQP DITSYDYDAP IGEAGDVTGN KYQGKCGRLV 360 SLGNMKLAEI RKVLSKYVGR ELPDPPPLPQ RTAYGEVTMT KMGSLFDVLD VIGNPPGGVK 420 LEWPVPMEHL RQVYTCKPLD CEHSAFSNSL NDLASGFILY RACLPSSVRP GSKISVVEVY 480 DRAQVFVVSA SKNRMFLGTL ERWSSNSIML PTAAAVADFR LDILVENMGR VNYGRYMGEN 540 KGISEAVFLD DDPILGWTIH TIGLESVSEL GPASFTTTGI ANSNLEITKI KPTIELLSDC 600 TLNVTQPSDT FMSFNGWNKG VAFVNGFNLG RFWPSAGPQC TLYVPSPLLR RGENKLIILE 660 LEDSRPVQTV EFKDRVDFTC GSY* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 0.0001 | 622 | 659 | 38 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| pfam02449 | Glyco_hydro_42 | 4.0e-7 | 60 | 186 | 144 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 1.0e-31 | 36 | 353 | 347 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 2.0e-41 | 3 | 345 | 356 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 9.0e-146 | 36 | 353 | 318 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI35958.1 | 0 | 27 | 682 | 73 | 702 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_565051.1 | 0 | 27 | 682 | 61 | 689 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_001762114.1 | 0 | 7 | 683 | 1 | 652 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772404.1 | 0 | 29 | 681 | 1 | 610 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002280228.1 | 0 | 27 | 682 | 49 | 678 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 22 | 675 | 2 | 618 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_C | 0 | 22 | 675 | 2 | 618 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_B | 0 | 22 | 675 | 2 | 618 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_A | 0 | 22 | 675 | 2 | 618 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thc_D | 0 | 22 | 675 | 2 | 618 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
