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Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s52_88V6.1 |
Family | GT34 |
Protein Properties | Length: 408 Molecular Weight: 46873.6 Isoelectric Point: 7.2568 |
Chromosome | Chromosome/Scaffold: 52 Start: 921290 End: 925002 |
Description | xylosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT34 | 104 | 341 | 0 |
TRIMLITSSHPKKCDNKQGDQMLLKSIKNKLDYCRIHGIELYYNMDKIDDEMLGWWVKTFLTHMLMKEHPEIDWFWWMDSDAIFTDMTFELPLHKYENYN MVMHGWDDAVYEKRSWLGLNAGVFLIRNCQWSMDLLHAWAPMSPKGKIRDDVGKFLSKALPDRGKGEADDQSGLVYLMITDRERWGSKVYLESSYYFQGY WKVLTEKFEDMMAKYKPGIYGDDRWPFVTHFCGCEFCC |
Full Sequence |
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Protein Sequence Length: 408 Download |
MLSLAAGASI HALACLDFRG RLESTAPVDF AAVCQEVVQP YEEWSSTIDK PRAKPLDQCT 60 EVERRVAELV ASTTSSTVED KHLQTRKQAI RRSTNSSSGV NPKTRIMLIT SSHPKKCDNK 120 QGDQMLLKSI KNKLDYCRIH GIELYYNMDK IDDEMLGWWV KTFLTHMLMK EHPEIDWFWW 180 MDSDAIFTDM TFELPLHKYE NYNMVMHGWD DAVYEKRSWL GLNAGVFLIR NCQWSMDLLH 240 AWAPMSPKGK IRDDVGKFLS KALPDRGKGE ADDQSGLVYL MITDRERWGS KVYLESSYYF 300 QGYWKVLTEK FEDMMAKYKP GIYGDDRWPF VTHFCGCEFC CGAINPEYTV DRCLTQMERA 360 VNFADNQVLE RYGFIHKSLK SAEVESREAA KNRTAKASVA AKSKKAV* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05637 | Glyco_transf_34 | 4.0e-54 | 105 | 340 | 262 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03181 | PLN03181 | 5.0e-112 | 105 | 385 | 315 | + glycosyltransferase; Provisional | ||
PLN03182 | PLN03182 | 0 | 84 | 385 | 302 | + xyloglucan 6-xylosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24302.1 | 0 | 103 | 385 | 137 | 416 | unknown [Picea sitchensis] |
RefSeq | XP_001761988.1 | 0 | 84 | 407 | 39 | 362 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001765298.1 | 0 | 84 | 385 | 10 | 311 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001767288.1 | 0 | 84 | 406 | 23 | 347 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781241.1 | 0 | 84 | 384 | 9 | 309 | predicted protein [Physcomitrella patens subsp. patens] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC399108 | 277 | 95 | 371 | 0 |
FC330112 | 206 | 84 | 289 | 0 |
FC334166 | 206 | 180 | 385 | 0 |
BY970307 | 193 | 84 | 276 | 0 |
DV979949 | 276 | 103 | 378 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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