Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s530_2V6.1 |
Family | GT47 |
Protein Properties | Length: 590 Molecular Weight: 67575.2 Isoelectric Point: 6.0191 |
Chromosome | Chromosome/Scaffold: 530 Start: 57289 End: 59584 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 165 | 501 | 0 |
CEGRYVYVYEMDPYFNEDMVEHCDKLNIWNNWCPSVSNEGLGPPMVNTDNVFSDSDWYETNQFMLERIFHNRLKRYKCLTKDSSRAAAVFVPFYAGFEIS TKLWRANISERDAAPARLYSWLAEQPEWKRYNGRDHFMVGGRITWDFRRRTDDESDWGNKLFVLSAALNMTMLSIEASPWHQNDVGIPYPTYFHPSSKRS IETWQDRVRAMDRPSLFSFVGAPRPGLSHSIRGVIKDQCIKSKQCRLLDCKGTLCQRPHKVMEIFEHSVFCLQPAGDSYTRRSTFDAMLAGCIPVFFHEY SAYTQYQWHLPSNHTSYSVLIDEGSIKNETVRIEEVL |
Full Sequence |
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Protein Sequence Length: 590 Download |
MTFLGVLSGP KMGYGLGIKE NGEKAKYPAH RFRSRCIFIL LTIVFWWALL MVHFSFHYRS 60 SPVQSSIGDV MISVQTQDSM SKSLSRGLST DSTYDSSAGD SSETEKMVQK KWLKDGDVHH 120 VNERPDMEIM NDQVDVDDDT PLEIKSVESH FDEGDPTMEQ PIPGCEGRYV YVYEMDPYFN 180 EDMVEHCDKL NIWNNWCPSV SNEGLGPPMV NTDNVFSDSD WYETNQFMLE RIFHNRLKRY 240 KCLTKDSSRA AAVFVPFYAG FEISTKLWRA NISERDAAPA RLYSWLAEQP EWKRYNGRDH 300 FMVGGRITWD FRRRTDDESD WGNKLFVLSA ALNMTMLSIE ASPWHQNDVG IPYPTYFHPS 360 SKRSIETWQD RVRAMDRPSL FSFVGAPRPG LSHSIRGVIK DQCIKSKQCR LLDCKGTLCQ 420 RPHKVMEIFE HSVFCLQPAG DSYTRRSTFD AMLAGCIPVF FHEYSAYTQY QWHLPSNHTS 480 YSVLIDEGSI KNETVRIEEV LLKFTSNQIV SMRETVIQTI PRIVYADPRA SSIPDVEDAF 540 DIAIQGVIDR ITLGKEVTRT NSEAISNSEL DFQSKSQQGQ SLHEQAAHK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-63 | 165 | 504 | 355 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 157 | 552 | 149 | 545 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
RefSeq | XP_001751549.1 | 0 | 141 | 547 | 2 | 410 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001785838.1 | 0 | 158 | 524 | 1 | 367 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001785839.1 | 0 | 158 | 545 | 1 | 388 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002301846.1 | 0 | 140 | 563 | 93 | 524 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |