Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s53_16V6.1 |
Family | AA5 |
Protein Properties | Length: 539 Molecular Weight: 57812.9 Isoelectric Point: 4.8987 |
Chromosome | Chromosome/Scaffold: 53 Start: 70659 End: 73179 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 23 | 533 | 0 |
LGTWELLVDNAGIAAMHAAVTRFGTVVLLDRTNTGASQIALPDGVCRDSNDMVLKHDCTAHSVLFDPSTNSVRPLTIQTDTWCSSGQFMPDGTLMQTGGD FEGVRKVRTFTPCPATETCDWVESTELILASPRWYATNQLLPDGHQIIIGGRSAFNLEYMPPSAASSAAALYFDFLNATNDAQNDNLYPFVHLLPDGNLY IFANQDSIVYNYVANAVVKRFPKIPGGPRNYPSAGSSVMLPLLASNQFSTVEILVCGGAQYGAYLEPWKHLPCSTTCERITVTDIDPIWVEEIMPVARCM GDMVLLPTMDVLIINGAAKGSQGWGNAIEPVLNPVQYSTYAAPGERFTTMAPSTIPRLYHSTASLLQDGRILLAGSNSHQFYTFTGDFPTELRIDAFSPP YLAPSQAGNKPTISVYPLVITYSAPFTVTVSAPLAMAGVSVNLISAPYNTHSYSQGQRLVSLNVGGIVQVAQASVYQITVTAPPSPSVAPPGYYMMVAVN QGVPSSAVWIQ |
Full Sequence |
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Protein Sequence Length: 539 Download |
MQAAIAVLTM LFARGPGVHG QDLGTWELLV DNAGIAAMHA AVTRFGTVVL LDRTNTGASQ 60 IALPDGVCRD SNDMVLKHDC TAHSVLFDPS TNSVRPLTIQ TDTWCSSGQF MPDGTLMQTG 120 GDFEGVRKVR TFTPCPATET CDWVESTELI LASPRWYATN QLLPDGHQII IGGRSAFNLE 180 YMPPSAASSA AALYFDFLNA TNDAQNDNLY PFVHLLPDGN LYIFANQDSI VYNYVANAVV 240 KRFPKIPGGP RNYPSAGSSV MLPLLASNQF STVEILVCGG AQYGAYLEPW KHLPCSTTCE 300 RITVTDIDPI WVEEIMPVAR CMGDMVLLPT MDVLIINGAA KGSQGWGNAI EPVLNPVQYS 360 TYAAPGERFT TMAPSTIPRL YHSTASLLQD GRILLAGSNS HQFYTFTGDF PTELRIDAFS 420 PPYLAPSQAG NKPTISVYPL VITYSAPFTV TVSAPLAMAG VSVNLISAPY NTHSYSQGQR 480 LVSLNVGGIV QVAQASVYQI TVTAPPSPSV APPGYYMMVA VNQGVPSSAV WIQCSQGM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 4.0e-14 | 433 | 533 | 102 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-19 | 429 | 533 | 106 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 3.0e-114 | 38 | 280 | 245 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001762124.1 | 0 | 10 | 538 | 1 | 529 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001765643.1 | 0 | 20 | 535 | 20 | 534 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771982.1 | 0 | 7 | 535 | 19 | 547 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001778975.1 | 0 | 1 | 535 | 1 | 533 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783776.1 | 0 | 24 | 533 | 14 | 523 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eid_A | 0.0000001 | 87 | 536 | 207 | 639 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2eib_A | 0.0000001 | 87 | 536 | 207 | 639 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eic_A | 0.0000002 | 87 | 536 | 207 | 639 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2vz3_A | 0.0000002 | 87 | 536 | 207 | 639 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2vz1_A | 0.0000002 | 87 | 536 | 207 | 639 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |