| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s58_61V6.1 |
| Family | AA3 |
| Protein Properties | Length: 776 Molecular Weight: 83906 Isoelectric Point: 8.6841 |
| Chromosome | Chromosome/Scaffold: 58 Start: 290587 End: 294866 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 257 | 766 | 0 |
| GDLGISCDVVVVGSGCGGGVIASVLAKAGYQVVILEKGKYFRTEDLTTLEGPSQMAMFEKLGSLATDDGGVNLVAGATVGGGTAINWSACFETPSHVLQE WKQISGLELFTSTRYKLAMKKIWHRLNVQPNIARENLQNSVLRAGCEKLSAEVGTLARNAPVDHDCGWCTYGCPSGQKGSTTSTWLKDAAESKNAVLLSE CEAQRILFSKNHSGRKHYKARGVMAVVGSSKKRIFIEAQSVVVASGSLMTPPLLLNSGLRNPNIGKGLHLHPVVFMWGYFPEESGFPGTCYEGAIMTSYS PIYKKNGSFPVALLEVPSTHPGSFASFQPWTSAADFKERMRRFSRTVTLCAVTRDTSNGQVSVEADGKPKIDYTLNAVDEETILEGIEKGLRVLIAAGAT EIGTHQQDGERFCVKGANSRDIEAYIKRVRSRGVKKNKIIIGSGHHMGSCKMGSDPRRSAVDGEGETWEVEGLYVSDGSVLPSAIGVNPMVTIQSVAYCI AHSVLQSLDS | |||
| Full Sequence |
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| Protein Sequence Length: 776 Download |
| MDAPENDLCR AGQSPPGHPL LKSWNPPTQH SFTKAQLRTL ISICDAFSPS LSPPAECEEK 60 QEIASFYTCS ASDMGVPEDI AGLLHVLLKP QLLMAIRVFL WLLSTRIGTL ILGGRASLTT 120 QFPFFQSFAY LSTDKQEDIL RGWSLSTLGA FRAVYKLFKM ITMWAVYTKI ENGGFNRNWK 180 AIGYCGADPQ VIRSRKCSSN DGVRSNPLQD MVIATQAAGD KLEKVLSRAG VKVLNDDIPL 240 KKLASGNRNR NNSAAGGDLG ISCDVVVVGS GCGGGVIASV LAKAGYQVVI LEKGKYFRTE 300 DLTTLEGPSQ MAMFEKLGSL ATDDGGVNLV AGATVGGGTA INWSACFETP SHVLQEWKQI 360 SGLELFTSTR YKLAMKKIWH RLNVQPNIAR ENLQNSVLRA GCEKLSAEVG TLARNAPVDH 420 DCGWCTYGCP SGQKGSTTST WLKDAAESKN AVLLSECEAQ RILFSKNHSG RKHYKARGVM 480 AVVGSSKKRI FIEAQSVVVA SGSLMTPPLL LNSGLRNPNI GKGLHLHPVV FMWGYFPEES 540 GFPGTCYEGA IMTSYSPIYK KNGSFPVALL EVPSTHPGSF ASFQPWTSAA DFKERMRRFS 600 RTVTLCAVTR DTSNGQVSVE ADGKPKIDYT LNAVDEETIL EGIEKGLRVL IAAGATEIGT 660 HQQDGERFCV KGANSRDIEA YIKRVRSRGV KKNKIIIGSG HHMGSCKMGS DPRRSAVDGE 720 GETWEVEGLY VSDGSVLPSA IGVNPMVTIQ SVAYCIAHSV LQSLDSQYKS STAKL* 780 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 5.0e-6 | 701 | 744 | 44 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 5.0e-8 | 432 | 753 | 343 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 5.0e-25 | 611 | 756 | 151 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-29 | 397 | 749 | 389 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 5.0e-54 | 341 | 529 | 192 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR17814.1 | 0 | 17 | 772 | 9 | 739 | unknown [Picea sitchensis] |
| GenBank | ACF22878.1 | 0 | 29 | 764 | 2 | 716 | alcohol oxidase [Glycine max] |
| RefSeq | XP_001753124.1 | 0 | 88 | 774 | 1 | 699 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761391.1 | 0 | 174 | 765 | 97 | 681 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001763007.1 | 0 | 1 | 775 | 1 | 775 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3red_L | 0.000008 | 262 | 762 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_K | 0.000008 | 262 | 762 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_J | 0.000008 | 262 | 762 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_I | 0.000008 | 262 | 762 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_H | 0.000008 | 262 | 762 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC405114 | 262 | 309 | 570 | 0 |
| BJ170452 | 233 | 544 | 776 | 0 |
| FC340664 | 228 | 544 | 771 | 0 |
| FC433413 | 279 | 145 | 423 | 0 |
| BJ168279 | 210 | 566 | 775 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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