| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s5_311V6.1 |
| Family | CBM57 |
| Protein Properties | Length: 654 Molecular Weight: 70971 Isoelectric Point: 7.2998 |
| Chromosome | Chromosome/Scaffold: 5 Start: 2189655 End: 2193699 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 249 | 388 | 2.4e-21 |
| DRYWATDRTLFAPGSPTTMLHTNANISNFGNPPNIYPEAIYQTATTTGPLSILSYSISVPSNQNYSIWLHFAEIEPGVIAPGMRVFDVKVNDDYLFHAVD IVKMAGAPFRALILNKTIPVASNTLKLSFIPLVGSVSVNA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 654 Download |
| MHRNSVAFPA DLHIGLLRHW IHGLQLVYFV ILTLYNALLL LHVIPTCESQ LGRIGPLAVR 60 IACGSTADSI ANETGYVWSK DFGFSGGKGA PTKAVNGIAT HLNSLRYFDS LDGPQNCYNI 120 SVPSGHYLTR FFFTFGETDN AGQEPVFELS LEGTLVYSLA PGWSSYDDNH YGDSLLHITD 180 GSATVCFHRS SHGNPAIGSI EILQLYVDAY NLGSSANLNV IMRTIKRVTA GAAESGYGSR 240 MHADAWGGDR YWATDRTLFA PGSPTTMLHT NANISNFGNP PNIYPEAIYQ TATTTGPLSI 300 LSYSISVPSN QNYSIWLHFA EIEPGVIAPG MRVFDVKVND DYLFHAVDIV KMAGAPFRAL 360 ILNKTIPVAS NTLKLSFIPL VGSVSVNAFE VFQIIPREYA TLDDNVWALQ AIKQSQDLPT 420 RLGWNGDPCV PPVHPWIGVK CSFESVVGAW FVSSLALDQQ GVRGQLGDGW VGLNHLQSLN 480 LSNNILDGVI PSSFGNLTIL TSLDLSHNRL NGQIPASLGQ LSNLKQLLLN DNLLSGEVPP 540 ELGALPIRGA VLNVANNPDL CGVGIRSCTK AYVKLGLMIS LVVGLCVLAA GIIFLWRKRK 600 ANSRGAQRLP RDAPYAKART TFVRDVQMAR NVLQNHFSRP APAYTEATPL NPY* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 1.0e-7 | 488 | 603 | 146 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 5.0e-15 | 247 | 377 | 139 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 1.0e-47 | 61 | 394 | 354 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 49 | 651 | 611 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABH07898.1 | 0 | 59 | 636 | 1 | 586 | leucine-rich repeat family protein [Solanum lycopersicum] |
| RefSeq | XP_001752825.1 | 0 | 56 | 653 | 1 | 597 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001756784.1 | 0 | 162 | 641 | 4 | 485 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002305781.1 | 0 | 59 | 631 | 1 | 578 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 26 | 636 | 1 | 616 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.00000001 | 474 | 542 | 391 | 459 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 3rj0_A | 0.0000001 | 479 | 568 | 658 | 745 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 3rj0_A | 0.0000002 | 462 | 543 | 451 | 532 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 3rj0_A | 0.0000007 | 452 | 542 | 393 | 483 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 3rj0_A | 0.0000009 | 452 | 539 | 465 | 552 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
