Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s5_370V6.1 |
Family | GT47 |
Protein Properties | Length: 553 Molecular Weight: 62756.7 Isoelectric Point: 7.1275 |
Chromosome | Chromosome/Scaffold: 5 Start: 2649075 End: 2650733 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 156 | 494 | 0 |
CDGRRVHMYDMPKEFNTKLLELCDGELVDWIHFCKHCKNFGFGEKVNTTNEIFQKDWYGTDAYMLEVIFFKRMRHYPCLTTSPDNADIFFIPYFAGLDAL PYLYNSTKRFDKQGYEVLAWLRSKAAKSWARYGGVDHFMIAGRTGWDFGTPSADGWGTWLFGLPGFENITFMELERRPWRSQEQAIPYPVGYHPSSAASL ERWIERVRSSVRTALFSFSGALRPNLSIRGMLSNECVNATTECARLDCAKISCSHNPVPIYESLLTADFCLQPRGDTATRRSTIDSIVSGCIPVLFHEDS AEKQYIWHLPEDYKNFSVFIHEDCVTSGKCVVRDILKRI |
Full Sequence |
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Protein Sequence Length: 553 Download |
MDVPKMSAKK HRAQSSKRRL ILKCFIAIIV VLFMTYISPG PGKFQTESQL QNPQKLMEAH 60 SLPQVAQSLP QEAHSLPQET HSLPHVSYSI PVETHSLPVE THSLPVDTHS LPVDTHSFPV 120 DTHSLPVDTH SLPVDTHSFP VDTHSLPNVP QLRDVCDGRR VHMYDMPKEF NTKLLELCDG 180 ELVDWIHFCK HCKNFGFGEK VNTTNEIFQK DWYGTDAYML EVIFFKRMRH YPCLTTSPDN 240 ADIFFIPYFA GLDALPYLYN STKRFDKQGY EVLAWLRSKA AKSWARYGGV DHFMIAGRTG 300 WDFGTPSADG WGTWLFGLPG FENITFMELE RRPWRSQEQA IPYPVGYHPS SAASLERWIE 360 RVRSSVRTAL FSFSGALRPN LSIRGMLSNE CVNATTECAR LDCAKISCSH NPVPIYESLL 420 TADFCLQPRG DTATRRSTID SIVSGCIPVL FHEDSAEKQY IWHLPEDYKN FSVFIHEDCV 480 TSGKCVVRDI LKRIPQSEVL KKREKLISMI PSVVYRHPLA SDFLQKDAFD LAIDGMLRKA 540 AELKESSQNS IV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-49 | 156 | 494 | 356 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001752641.1 | 0 | 156 | 546 | 7 | 403 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001752721.1 | 0 | 57 | 552 | 1 | 496 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001761213.1 | 0 | 146 | 552 | 27 | 439 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001763405.1 | 0 | 154 | 539 | 1 | 386 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773063.1 | 0 | 156 | 544 | 1 | 395 | predicted protein [Physcomitrella patens subsp. patens] |