Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s67_89V6.1 |
Family | CE8 |
Protein Properties | Length: 429 Molecular Weight: 48238.4 Isoelectric Point: 8.7288 |
Chromosome | Chromosome/Scaffold: 67 Start: 679869 End: 682347 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 120 | 411 | 0 |
ITVSKFGKDDFITINAALDSIAEHERHRTVIHIREGVYEEKIVINASKPYITFRGDGLDKTIIQWGDQAGDFDDDDQMLKTYRSATVGVSSQYFIAENIQ FRNTAPQPPPGAVLRQAVALRITGDRAAFYNCAFYGFQDTLYDHKGRHYFENCYIQGSIDFVFGNGRSLYKNCHLHSEAKVFGSVTAQKRNESHMNTGFS FVDASITGRGPIYLGRAWGNFSRTVFSYTWMDNIVYPPGWSDFGFADRQKKVFYAQYNCRGPGAYSKERVAWVRELTAEEAKPFLSVHFING |
Full Sequence |
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Protein Sequence Length: 429 Download |
MLQPTISSWF VLLASMGLLR RKLMLLLLLV AFTFAAVIAD ASGEDDNVDT WLKFMAETSG 60 SDADPDYDAE TDGTPASGSH YENSFVTERD NHTPDGTKSE ATANGMFVKF PKPKGKSRKI 120 TVSKFGKDDF ITINAALDSI AEHERHRTVI HIREGVYEEK IVINASKPYI TFRGDGLDKT 180 IIQWGDQAGD FDDDDQMLKT YRSATVGVSS QYFIAENIQF RNTAPQPPPG AVLRQAVALR 240 ITGDRAAFYN CAFYGFQDTL YDHKGRHYFE NCYIQGSIDF VFGNGRSLYK NCHLHSEAKV 300 FGSVTAQKRN ESHMNTGFSF VDASITGRGP IYLGRAWGNF SRTVFSYTWM DNIVYPPGWS 360 DFGFADRQKK VFYAQYNCRG PGAYSKERVA WVRELTAEEA KPFLSVHFIN GKTWLKKFLG 420 KSKKSKRH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 2.0e-99 | 110 | 411 | 311 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-102 | 117 | 411 | 297 | + pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-109 | 118 | 411 | 296 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 1.0e-109 | 109 | 411 | 304 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 6.0e-139 | 110 | 411 | 306 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001756557.1 | 0 | 118 | 415 | 1 | 298 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762576.1 | 0 | 106 | 428 | 1 | 323 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001764345.1 | 0 | 106 | 428 | 1 | 323 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002514210.1 | 0 | 129 | 416 | 95 | 382 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
RefSeq | XP_002531506.1 | 0 | 110 | 415 | 55 | 364 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 120 | 416 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.99965e-42 | 121 | 416 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-28 | 128 | 403 | 42 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 3e-21 | 129 | 403 | 14 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-21 | 129 | 403 | 14 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |