Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s67_89V6.2 |
Family | CE8 |
Protein Properties | Length: 414 Molecular Weight: 46563.3 Isoelectric Point: 8.7288 |
Chromosome | Chromosome/Scaffold: 67 Start: 679869 End: 682732 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 105 | 396 | 0 |
ITVSKFGKDDFITINAALDSIAEHERHRTVIHIREGVYEEKIVINASKPYITFRGDGLDKTIIQWGDQAGDFDDDDQMLKTYRSATVGVSSQYFIAENIQ FRNTAPQPPPGAVLRQAVALRITGDRAAFYNCAFYGFQDTLYDHKGRHYFENCYIQGSIDFVFGNGRSLYKNCHLHSEAKVFGSVTAQKRNESHMNTGFS FVDASITGRGPIYLGRAWGNFSRTVFSYTWMDNIVYPPGWSDFGFADRQKKVFYAQYNCRGPGAYSKERVAWVRELTAEEAKPFLSVHFING |
Full Sequence |
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Protein Sequence Length: 414 Download |
MGLLRRKLML LLLLVAFTFA AVIADASGED DNVDTWLKFM AETSGSDADP DYDAETDGTP 60 ASGSHYENSF VTERDNHTPD GTKSEATANG MFVKFPKPKG KSRKITVSKF GKDDFITINA 120 ALDSIAEHER HRTVIHIREG VYEEKIVINA SKPYITFRGD GLDKTIIQWG DQAGDFDDDD 180 QMLKTYRSAT VGVSSQYFIA ENIQFRNTAP QPPPGAVLRQ AVALRITGDR AAFYNCAFYG 240 FQDTLYDHKG RHYFENCYIQ GSIDFVFGNG RSLYKNCHLH SEAKVFGSVT AQKRNESHMN 300 TGFSFVDASI TGRGPIYLGR AWGNFSRTVF SYTWMDNIVY PPGWSDFGFA DRQKKVFYAQ 360 YNCRGPGAYS KERVAWVREL TAEEAKPFLS VHFINGKTWL KKFLGKSKKS KRH* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 2.0e-99 | 95 | 396 | 311 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-102 | 102 | 396 | 297 | + pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-109 | 103 | 396 | 296 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 2.0e-109 | 94 | 396 | 304 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-139 | 95 | 396 | 306 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001756557.1 | 0 | 103 | 400 | 1 | 298 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762576.1 | 0 | 91 | 413 | 1 | 323 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001764345.1 | 0 | 91 | 413 | 1 | 323 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002514210.1 | 0 | 114 | 401 | 95 | 382 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
RefSeq | XP_002531506.1 | 0 | 95 | 400 | 55 | 364 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 105 | 401 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.00053e-42 | 106 | 401 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-28 | 113 | 388 | 42 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 3e-21 | 117 | 388 | 17 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 3e-21 | 117 | 388 | 17 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |