CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s70_290V6.1
FamilyGH17
Protein PropertiesLength: 451 Molecular Weight: 48428.1 Isoelectric Point: 5.9306
ChromosomeChromosome/Scaffold: 70 Start: 1779959 End: 1783507
DescriptionO-Glycosyl hydrolases family 17 protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH17844020
  GINYGRLADNIPSGAETVKLIKNLGMGRVRIFDFDGPTIKAFAGSGLELTIGMGNLDIAALGQDASTADQWIANNVVPYYPATNITCITVGNELFTYPEQ
  AAIWPQLVPAIKNLHNSLQTRGLTRIKVSTAVEYSVLANSFPPSKGVFREELAVSVMKPLMEQLDATSSYLYLNVYPYFGYASNTVDIPLDYALFTRSSV
  FTVDGQYEYTNLLDAQLDAMAAAMEGVGYGDVRIVVSETGWPTLGDANTVGANISNAQTYNNNLVKWAISNPTKGTPRRPGIFVPTYIFAVYNEKDKPGP
  TTERNWGLLYPTGSPVYPL
Full Sequence
Protein Sequence     Length: 451     Download
MQCRGDSVVG RVGSSCTKSR MEMDCLVEYV PCEAREHSGL RQNGRFSRFL VRGMVSAIMC    60
ISVITSLAEP AMAANYAPEA RTMGINYGRL ADNIPSGAET VKLIKNLGMG RVRIFDFDGP    120
TIKAFAGSGL ELTIGMGNLD IAALGQDAST ADQWIANNVV PYYPATNITC ITVGNELFTY    180
PEQAAIWPQL VPAIKNLHNS LQTRGLTRIK VSTAVEYSVL ANSFPPSKGV FREELAVSVM    240
KPLMEQLDAT SSYLYLNVYP YFGYASNTVD IPLDYALFTR SSVFTVDGQY EYTNLLDAQL    300
DAMAAAMEGV GYGDVRIVVS ETGWPTLGDA NTVGANISNA QTYNNNLVKW AISNPTKGTP    360
RRPGIFVPTY IFAVYNEKDK PGPTTERNWG LLYPTGSPVY PLVLSSSGGG GGGGSSPGGG    420
YDSQPKLCNG KPSVLSTSAS FFGILFNLRI * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00332Glyco_hydro_171.0e-9984402320+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001752959.10834011316predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001762206.10764076337predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001764817.10834001318predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001775379.10834501366predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001775863.10854506375predicted protein [Physcomitrella patens subsp. patens]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2cyg_A0834021310A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3f55_D0834052316A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3f55_C0834052316A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3f55_B0834052316A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3f55_A0834052316A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
Transmembrane Domains
StartEnd
4968
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BJ9755222262264510
BJ1683292072454510
BJ9670021891613490
CN2083162461563980
BJ967002311341640.00000000004
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_034_00089.1.45.369Aquca_009_00879.1.26.349
Arabidopsis lyrata493503.42.363479892.37.361317589.25.345
Arabidopsis thalianaAT4G14080.1.42.363AT3G23770.1.37.361AT3G07320.1.26.346
Brachypodium distachyonBradi4g34390.1.35.358Bradi3g40907.1.44.364Bradi5g12137.1.31.354
Brassica rapaBra001918.41.365Bra028343.37.360Bra029639.25.345Bra014979.39.363Bra001245.25.345
Bra032758.43.365Bra037057.43.364Bra038969.43.364
Carica papayaevm.model.supercontig_157.32.29.353evm.model.supercontig_8.110.24.345
Capsella rubellaCarubv10015952m.37.361Carubv10006945m.42.363Carubv10013655m.25.345
Citrus clementinaCiclev10004917m.28.352Ciclev10031440m.27.350
Citrus sinensisorange1.1g012660m.28.352orange1.1g038099m
Cucumis sativusCucsa.251950.1.28.351Cucsa.149990.1.26.347
Eucalyptus grandisEucgr.K02113.2.27.350Eucgr.K02113.1.27.350Eucgr.K02112.1
Fragaria vescamrna06587.1-v1.0-hybridmrna17437.1-v1.0-hybrid.135.456mrna17436.1-v1.0-hybrid.101.320mrna17436.1-v1.0-hybrid.101.320
Glycine maxGlyma13g24190.1Glyma08g46110.1.30.351Glyma18g32840.1.30.351
Gossypium raimondiiGorai.001G230200.2.24.345Gorai.001G230200.1.24.345Gorai.005G026800.1.26.346Gorai.N004800.1.27.348Gorai.006G224700.1.23.346
Linum usitatissimumLus10038211.25.346Lus10008881.29.352Lus10025892.18.281
Malus domesticaMDP0000317729.26.347MDP0000235663.26.347MDP0000283768.23.310
Manihot esculentacassava4.1_024973m.11.334cassava4.1_007070m.27.348cassava4.1_023781m.26.347
Medicago truncatulaMedtr8g012400.1.30.350
Mimulus guttatusmgv1a005896m.30.346mgv1a006049m.29.349mgv1a006924mmgv1a005774m.34.356
Oryza sativaLOC_Os08g41410.1.33.357LOC_Os09g32550.2.31.357LOC_Os09g32550.1.34.360LOC_Os03g62860.1.27.354
Panicum virgatumPavirv00008164m.48.370Pavirv00066351m.38.362Pavirv00059046m.35.359Pavirv00006057m.24.347Pavirv00044843m.143.335
Pavirv00044843m.143.335
Physcomitrella patensPp1s280_49V6.1Pp1s284_2V6.1Pp1s270_88V6.4.56.376Pp1s270_88V6.3.76.396Pp1s270_88V6.2.76.396
Pp1s270_88V6.1.56.376Pp1s218_3V6.2.53.373Pp1s218_3V6.1.53.373Pp1s268_55V6.2Pp1s40_200V6.1
Pp1s190_47V6.1Pp1s268_55V6.1Pp1s7_53V6.2Pp1s7_53V6.1Pp1s145_119V6.1
Pp1s197_147V6.1Pp1s312_32V6.1.39.359Pp1s53_51V6.2Pp1s53_51V6.1Pp1s26_167V6.1
Phaseolus vulgarisPhvul.003G073900.1Phvul.010G023800.1.27.348Phvul.008G142200.1.29.349
Picea abiesMA_17470g0010.39.361MA_7353g0010.32.349MA_90526g0010.38.336
Populus trichocarpaPotri.017G060300.1.27.350Potri.002G247900.2.27.348Potri.002G247900.1.27.348Potri.002G247800.1.27.348
Ricinus communis30157.m000802
Setaria italicaSi015679m.50.372Si029669m.38.362
Selaginella moellendorffii156981437767.30.349230318413735.93.40982448
66564
Sorghum bicolorSb07g026540.1.48.370Sb02g029080.1.37.361Sb01g001430.1.38.362
Thellungiella halophilaThhalv10025081m.43.364Thhalv10002513m.35.359Thhalv10020663m.34.354Thhalv10020660m.34.354
Vitis viniferaGSVIVT01031698001.29.351GSVIVT01031619001.25.211
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)