| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s78_128V6.1 |
| Family | GT43 |
| Protein Properties | Length: 395 Molecular Weight: 44333.7 Isoelectric Point: 9.5334 |
| Chromosome | Chromosome/Scaffold: 78 Start: 835541 End: 839738 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT43 | 48 | 308 | 2.8026e-43 |
| LMCTLSLVRGPVTWIVIEAGGISAETVELLKLARVHKLVHLGASAHLPRSLQDRRILDSHLRVEGLRYVREQNLEGVVVFADVGNVYSMQFFNEIQKISW VGSVPVGILGHAGFEDPALSRHRDSLTESGVRVPSRRVVASPQAMLAFRNGVVQVQGPACDSFGNITGWHAIGSLSLDDELMKTNSAEETNLVWAGFVLN ARAVWVSDPDRPKWIQEWIKWACAEEGVYIDWRSLLRDEAKVETLGPCRSDKEVFVWWARI | |||
| Full Sequence |
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| Protein Sequence Length: 395 Download |
| MEMAQAYNMI ARVQLEQHRL YEIKSWKPII AITPTYLRTF QSLHLAGLMC TLSLVRGPVT 60 WIVIEAGGIS AETVELLKLA RVHKLVHLGA SAHLPRSLQD RRILDSHLRV EGLRYVREQN 120 LEGVVVFADV GNVYSMQFFN EIQKISWVGS VPVGILGHAG FEDPALSRHR DSLTESGVRV 180 PSRRVVASPQ AMLAFRNGVV QVQGPACDSF GNITGWHAIG SLSLDDELMK TNSAEETNLV 240 WAGFVLNARA VWVSDPDRPK WIQEWIKWAC AEEGVYIDWR SLLRDEAKVE TLGPCRSDKE 300 VFVWWARIEA HSDSKYPSRW DLDSPPEVVV PAKKTPWPDK VLSPSSQLPP VGKRRDGNRS 360 DGRDGRTRQS QRRPHSVKGK TLGNQRETIA TKNT* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 7.0e-13 | 29 | 258 | 234 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 7.0e-20 | 48 | 310 | 273 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 4.0e-32 | 27 | 310 | 289 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21374.1 | 0 | 2 | 339 | 102 | 419 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_001755715.1 | 0 | 1 | 319 | 22 | 328 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001765650.1 | 0 | 1 | 319 | 123 | 417 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001778969.1 | 0 | 1 | 339 | 22 | 337 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002283249.1 | 0 | 2 | 339 | 140 | 457 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d0j_D | 0.00000005 | 29 | 164 | 5 | 143 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_C | 0.00000005 | 29 | 164 | 5 | 143 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_B | 0.00000005 | 29 | 164 | 5 | 143 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_A | 0.00000005 | 29 | 164 | 5 | 143 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 1kws_B | 0.000003 | 29 | 170 | 3 | 161 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC341035 | 229 | 67 | 295 | 0 |
| BY945295 | 168 | 1 | 168 | 0 |
| HO800917 | 347 | 1 | 339 | 0 |
| CO114164 | 312 | 32 | 339 | 0 |
| DC945448 | 201 | 192 | 392 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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