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Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s78_68V6.1 |
Family | AA3 |
Protein Properties | Length: 483 Molecular Weight: 51786.1 Isoelectric Point: 8.5632 |
Chromosome | Chromosome/Scaffold: 78 Start: 419693 End: 423203 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 18 | 478 | 0 |
APPVATDFDYIIVGGGTAGCPLAATLSLNYSVLLLERGNTPYGNPDIESAANFGKLISNIQGNTWFSPVQSFQSQDGVFNRRARVLGGGSSINAGFYSRA SDDYVSRAGWDAGMVASAYEWVESVVAFFPRLQQWQTAVRDALLEVGVGPDNGRTYKHASGTKVGGSIFDEAGKRHTAADLLQFANPNNITVLLFANVHR ILFAPPVPRSPPRAIGTVFSDSLGIRHLAMLREPLKSQILLAAGAIGSPHFLMLSGVGDVDILEPYRVPVVLNSSSVGKGMTDNPANSMYVPSRIPVEIS LMQTVGITDFGGFIETSSGIRAVLFQLESLVTTPPSLRSKNLLLKNIEELRNLPLETQRMLGQAGVIFQKVDVPASTGTLKICIHDVKTLSEWCRNTVTT IWQYHGGCQVGRVVDAEYRVIGAHGLRVIDGSTFNSSPGTNPQATVMMLGRYMGVKILQER |
Full Sequence |
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Protein Sequence Length: 483 Download |
MAGGRGGDYP FLKNASAAPP VATDFDYIIV GGGTAGCPLA ATLSLNYSVL LLERGNTPYG 60 NPDIESAANF GKLISNIQGN TWFSPVQSFQ SQDGVFNRRA RVLGGGSSIN AGFYSRASDD 120 YVSRAGWDAG MVASAYEWVE SVVAFFPRLQ QWQTAVRDAL LEVGVGPDNG RTYKHASGTK 180 VGGSIFDEAG KRHTAADLLQ FANPNNITVL LFANVHRILF APPVPRSPPR AIGTVFSDSL 240 GIRHLAMLRE PLKSQILLAA GAIGSPHFLM LSGVGDVDIL EPYRVPVVLN SSSVGKGMTD 300 NPANSMYVPS RIPVEISLMQ TVGITDFGGF IETSSGIRAV LFQLESLVTT PPSLRSKNLL 360 LKNIEELRNL PLETQRMLGQ AGVIFQKVDV PASTGTLKIC IHDVKTLSEW CRNTVTTIWQ 420 YHGGCQVGRV VDAEYRVIGA HGLRVIDGST FNSSPGTNPQ ATVMMLGRYM GVKILQERQL 480 AA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2303 | BetA | 3.0e-10 | 406 | 481 | 83 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
COG2303 | BetA | 6.0e-22 | 21 | 302 | 320 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
TIGR03970 | Rv0697 | 1.0e-25 | 26 | 467 | 496 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PLN02785 | PLN02785 | 1.0e-38 | 403 | 478 | 76 | + Protein HOTHEAD | ||
PLN02785 | PLN02785 | 2.0e-145 | 8 | 405 | 418 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001765687.1 | 0 | 6 | 474 | 2 | 535 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002267807.1 | 0 | 8 | 478 | 31 | 559 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002267848.1 | 0 | 8 | 478 | 31 | 559 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509694.1 | 0 | 8 | 478 | 34 | 541 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
RefSeq | XP_002510860.1 | 0 | 9 | 478 | 31 | 570 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 8 | 478 | 8 | 517 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 3gdp_A | 0 | 8 | 478 | 8 | 517 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 3gdn_B | 0 | 8 | 478 | 8 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 8 | 478 | 8 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 8 | 478 | 8 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO080148 | 295 | 8 | 302 | 0 |
HO796743 | 391 | 26 | 405 | 0 |
DT559636 | 268 | 8 | 275 | 0 |
CK271873 | 313 | 25 | 337 | 0 |
HO796743 | 77 | 402 | 478 | 1e-28 |
Sequence Alignments (This image is cropped. Click for full image.) |
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