| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s7_216V6.1 |
| Family | AA3 |
| Protein Properties | Length: 798 Molecular Weight: 86420.5 Isoelectric Point: 8.3606 |
| Chromosome | Chromosome/Scaffold: 7 Start: 1163974 End: 1166812 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 287 | 787 | 0 |
| MECDVVIVGSGSGGGVMAAVLAKQGFKVLVLEKGQYFAAQDITSLEGPGMVNMYEKMGAQSTDDGGVSLIAGKTVGGGTAVNWCVSFKTPEHVRNEWVND HGLDLFTSAQYEQAMQAVWKRLAVQPEVDKHSLQNTVLLEGCKKLGYECGTLQRNCSPGHYCGWCSYGCPTGKKQSTAETWLVDAVNTGNAVILSNCHAK HVFHDANPGGKKARKGHGVVATIGEGSTRIFVKANATVIACGALLTPPLLLRSGLKNPNIGKYLRVHPATTCFGYFPEEVEPKGKSYEGGIMTTYSPVTL RKPTEYGGLLETGVFHPAVFAAFHPWQSGADGKERLLHHARTSHITVVTRDKGFGTAKIDNDGLPMYSYKISPYDEQTLIAGMIQSLRILVAAGAVEIGT QQLDGERFKVKGATPAQIEEYLDRVKRRRARQSSIQIASAHQLGSCRMGTSPRTSAVDARGETWEAEGVFVADGSVLPTSSGVNPMVTIQSIAYCTADSV A | |||
| Full Sequence |
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| Protein Sequence Length: 798 Download |
| MAIGNGQAEF ENGTQPEGSP DFQDDVKCDR NKPVVHGHPA LLRWTPPRNH NLSPTQFESL 60 KSIADTFVPS LPPPFKAGEE FELMPGVTAE DVARFYKLKA SDEDIINVMA AILEVLMRPP 120 VLKSVLAVLQ LLGTGWGTAL LACGGGVNTV SLKYPFFRKF ANLTPEEREK MLQGWSTSLL 180 SPLRRLFKSM KSITGYTLYS KINDEGENAA WKAIGYTGMD PTVRSRSKEE YWKPRPLGDG 240 HVDAKEAGVR LKAILGAKGF SVLDEIKSFR VQSRKWGYSE SSSDIYMECD VVIVGSGSGG 300 GVMAAVLAKQ GFKVLVLEKG QYFAAQDITS LEGPGMVNMY EKMGAQSTDD GGVSLIAGKT 360 VGGGTAVNWC VSFKTPEHVR NEWVNDHGLD LFTSAQYEQA MQAVWKRLAV QPEVDKHSLQ 420 NTVLLEGCKK LGYECGTLQR NCSPGHYCGW CSYGCPTGKK QSTAETWLVD AVNTGNAVIL 480 SNCHAKHVFH DANPGGKKAR KGHGVVATIG EGSTRIFVKA NATVIACGAL LTPPLLLRSG 540 LKNPNIGKYL RVHPATTCFG YFPEEVEPKG KSYEGGIMTT YSPVTLRKPT EYGGLLETGV 600 FHPAVFAAFH PWQSGADGKE RLLHHARTSH ITVVTRDKGF GTAKIDNDGL PMYSYKISPY 660 DEQTLIAGMI QSLRILVAAG AVEIGTQQLD GERFKVKGAT PAQIEEYLDR VKRRRARQSS 720 IQIASAHQLG SCRMGTSPRT SAVDARGETW EAEGVFVADG SVLPTSSGVN PMVTIQSIAY 780 CTADSVAHFL HGASSAK* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.0008 | 725 | 779 | 56 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 2.0e-24 | 646 | 780 | 137 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-27 | 282 | 784 | 562 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 4.0e-57 | 339 | 555 | 221 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001753124.1 | 0 | 117 | 797 | 1 | 699 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761391.1 | 4e-25 | 32 | 109 | 16 | 93 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761391.1 | 0 | 202 | 791 | 93 | 681 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001763007.1 | 0 | 37 | 797 | 17 | 774 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002269629.1 | 0 | 50 | 790 | 33 | 783 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ljp_B | 0.0000000001 | 358 | 786 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.0000000001 | 358 | 786 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3nne_H | 0.0000000002 | 358 | 786 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0000000002 | 358 | 786 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.0000000002 | 358 | 786 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 651 | 151 | 790 | 0 |
| DC883850 | 468 | 336 | 790 | 0 |
| FC437705 | 252 | 320 | 571 | 0 |
| FC402129 | 255 | 247 | 501 | 0 |
| FC433224 | 241 | 551 | 791 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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