Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s81_221V6.1 |
Family | GT47 |
Protein Properties | Length: 515 Molecular Weight: 58439 Isoelectric Point: 8.2914 |
Chromosome | Chromosome/Scaffold: 81 Start: 1283213 End: 1285212 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 122 | 456 | 0 |
CKNRYVHVLDVPKEFNEQLLQECHTLKDWSDMCVALSNAGLGPAMVDEDAFTSSGWYETNQFALEVIFHNRMRQYDCLTVDPSMASAIYVPFYPGLEASR TLWSSDIKARDTIPLKFVEWLQKQPEWAAHGGIDHFMVGGRITWDFRRQGNSWGNKLLTLPPMQNMTTLVIEASTWNTNDMGIPYPTYFHPSCDSEIRAW QQKVRSFQRNVLFSFAGGKRDNMARLIRGQVIDQCGRSPLCKLLSCDRGACQSPQPVMKLFKESQFCLQPQGDSATRRSIFDSMLAGCIPVFFHPESYSG YVWHLPKNQSEYSIFISEDQIRKGVLTVENVLRGV |
Full Sequence |
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Protein Sequence Length: 515 Download |
MKKVRFLKEK SRKDTIVFLE MRNRFVLAIS LLAFLTLVRY CRFANSLRGI APPIHESLQV 60 DSPLLSRAAK AQNLVHDRYG SVIRQAGTDT IILDEHEANF GGSLDGVRGK HKDGRGGIEA 120 LCKNRYVHVL DVPKEFNEQL LQECHTLKDW SDMCVALSNA GLGPAMVDED AFTSSGWYET 180 NQFALEVIFH NRMRQYDCLT VDPSMASAIY VPFYPGLEAS RTLWSSDIKA RDTIPLKFVE 240 WLQKQPEWAA HGGIDHFMVG GRITWDFRRQ GNSWGNKLLT LPPMQNMTTL VIEASTWNTN 300 DMGIPYPTYF HPSCDSEIRA WQQKVRSFQR NVLFSFAGGK RDNMARLIRG QVIDQCGRSP 360 LCKLLSCDRG ACQSPQPVMK LFKESQFCLQ PQGDSATRRS IFDSMLAGCI PVFFHPESYS 420 GYVWHLPKNQ SEYSIFISED QIRKGVLTVE NVLRGVETET IQRMRERIIG LIPNLVYADP 480 RMSILEESTD AFGITIKGVL ETISQKKWAT AQQF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-60 | 121 | 456 | 352 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 122 | 505 | 157 | 546 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
RefSeq | NP_001147481.1 | 0 | 122 | 505 | 143 | 532 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
Swiss-Prot | Q8H038 | 0 | 122 | 505 | 128 | 517 | KATAM_ORYSJ RecName: Full=Xyloglucan galactosyltransferase KATAMARI1 homolog |
RefSeq | XP_001766126.1 | 0 | 122 | 497 | 1 | 376 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001766875.1 | 0 | 122 | 499 | 1 | 378 | predicted protein [Physcomitrella patens subsp. patens] |