Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s81_236V6.1 |
Family | CE8 |
Protein Properties | Length: 373 Molecular Weight: 41168.5 Isoelectric Point: 10.4981 |
Chromosome | Chromosome/Scaffold: 81 Start: 1365026 End: 1366204 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 100 | 365 | 0 |
IIVDKQGKGHFRKVQDAIDSIKEGNKKRITIIIRAGTYVEKCRIPKTKPFITLLGSGTKTVLVWSDTAGKAGGTALSASFAVESEGFIQAVALRIQGDKG AFYRCRFFGAQDTLYDKQGRHYFRNCFIQGSIDWIFGNAQSMYHCCTIKSIAKRNSGSITAQKRSSKNSPTGFSFVRCKIFGTGSIYLGRAWGTHSRVVF IKCHMAKMILPIGWQDWNDPARQKTVFYAEYSCTGPGANREGRVKWSKLLSAKQAAPFYSYRFIDG |
Full Sequence |
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Protein Sequence Length: 373 Download |
MAALRVREVG LISLLVVVAV SFVLASVAAQ GSDEKAIAFT ALSRQPAQEG NEAEWNSYVE 60 RVVSRDIIKR KQMQTQELLG AMGVDDTMGV AAAVPKGRTI IVDKQGKGHF RKVQDAIDSI 120 KEGNKKRITI IIRAGTYVEK CRIPKTKPFI TLLGSGTKTV LVWSDTAGKA GGTALSASFA 180 VESEGFIQAV ALRIQGDKGA FYRCRFFGAQ DTLYDKQGRH YFRNCFIQGS IDWIFGNAQS 240 MYHCCTIKSI AKRNSGSITA QKRSSKNSPT GFSFVRCKIF GTGSIYLGRA WGTHSRVVFI 300 KCHMAKMILP IGWQDWNDPA RQKTVFYAEY SCTGPGANRE GRVKWSKLLS AKQAAPFYSY 360 RFIDGHKWLN KT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 2.0e-101 | 100 | 369 | 285 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-102 | 99 | 369 | 299 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-103 | 98 | 369 | 300 | + pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-109 | 89 | 369 | 303 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 3.0e-122 | 98 | 369 | 300 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001766064.1 | 0 | 88 | 372 | 1 | 293 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001774315.1 | 0 | 104 | 369 | 1 | 286 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777108.1 | 0 | 102 | 369 | 2 | 291 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001778325.1 | 0 | 55 | 369 | 44 | 368 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001785334.1 | 0 | 82 | 369 | 1 | 303 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 97 | 372 | 6 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4.06377e-44 | 101 | 372 | 6 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000007 | 88 | 357 | 23 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.00000002 | 110 | 249 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.00000002 | 110 | 249 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |