Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s83_137V6.1 |
Family | GH5 |
Protein Properties | Length: 355 Molecular Weight: 39929.8 Isoelectric Point: 6.2727 |
Chromosome | Chromosome/Scaffold: 83 Start: 985485 End: 986785 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 40 | 313 | 1.2e-22 |
PVGFNAHWLGIDEEFEYPSQKRIEEMFQVAEKMSATAIRSHTVGHSSGHTNSLRPLDRELNEKAWPSIDTALAMARKYDVRLIVPLTDNWFLYNGNYGNY CTPYGLPKNSFWTDRRVVDDFKDYITRYLNHVNTQTRVALKDDPYIFLIETGNELGNSGKNADSIPPESWIREISSHIKSVDSNHLVLDGCDASLGQSNN FHIDSVDVYSRHFYSDDIDSLNASATEAGKVGKPLIVGEFDSGASESWLAAMESNPNVKGTLFWHMYGHDDNGN |
Full Sequence |
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Protein Sequence Length: 355 Download |
MKLFCAVLLL SLGLLGHSAM GEFVRFSGSA FSLKGRPFIP VGFNAHWLGI DEEFEYPSQK 60 RIEEMFQVAE KMSATAIRSH TVGHSSGHTN SLRPLDRELN EKAWPSIDTA LAMARKYDVR 120 LIVPLTDNWF LYNGNYGNYC TPYGLPKNSF WTDRRVVDDF KDYITRYLNH VNTQTRVALK 180 DDPYIFLIET GNELGNSGKN ADSIPPESWI REISSHIKSV DSNHLVLDGC DASLGQSNNF 240 HIDSVDVYSR HFYSDDIDSL NASATEAGKV GKPLIVGEFD SGASESWLAA MESNPNVKGT 300 LFWHMYGHDD NGNRIRHNDG YTLYYKEESS QPALLRLANH ARRIRNLPLL DSLL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 0.007 | 107 | 279 | 192 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 0.004 | 35 | 294 | 303 | + Cellulase (glycosyl hydrolase family 5). |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201447.1 | 2e-26 | 3 | 279 | 9 | 321 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_001766238.1 | 0 | 6 | 354 | 64 | 412 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | YP_003009440.1 | 0 | 18 | 349 | 35 | 385 | Mannan endo-1,4-beta-mannosidase [Paenibacillus sp. JDR-2] |
RefSeq | YP_003009446.1 | 2e-28 | 23 | 319 | 47 | 348 | S-layer domain protein [Paenibacillus sp. JDR-2] |
RefSeq | ZP_04853596.1 | 0 | 22 | 325 | 5 | 305 | fibronectin type III domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 2e-21 | 23 | 337 | 6 | 364 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0.00000000000002 | 33 | 240 | 22 | 234 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0.00000000000002 | 33 | 240 | 22 | 234 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0.00000000000002 | 33 | 240 | 22 | 234 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0.00000000000002 | 33 | 240 | 22 | 234 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |