Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s83_48V6.1 |
Family | CBM57 |
Protein Properties | Length: 631 Molecular Weight: 68428.3 Isoelectric Point: 5.029 |
Chromosome | Chromosome/Scaffold: 83 Start: 451372 End: 456462 |
Description | Di-glucose binding protein with Leucine-rich repeat domain |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 208 | 355 | 1.2e-24 |
GYDNVTDLGGRSWVVDDDYTTNLKQFLTSAHNIVGANVAPNYWPVRLYQTCRYEQQPGVPITYNYLVDAKLDYQIWFHFAEIDPNITAAGQRVFNVTVNN VAVITGLDLFQKAGLNTAFDVVYTVRNLTEGLLVISLIPLIGSPLICG |
Full Sequence |
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Protein Sequence Length: 631 Download |
MAGLLLSGLW FLGLLRSSLA GGPGDFHVAI DCGGYLNFSN SINQTWLADN FFSGGKVANV 60 SHPENFPRQQ ERSLRYFPIS HGKKNCYEIS VPVARYMIQM FFAYNNFDNL SHSPSFDVSV 120 EGTVVFSWRY PWADDSDNYG AYSDLYAFIH DGSATICFYS IGTDAPVIGS LELLTVDDAA 180 YNSSSTGQNI ILANYGRVSG GDSSFGPGYD NVTDLGGRSW VVDDDYTTNL KQFLTSAHNI 240 VGANVAPNYW PVRLYQTCRY EQQPGVPITY NYLVDAKLDY QIWFHFAEID PNITAAGQRV 300 FNVTVNNVAV ITGLDLFQKA GLNTAFDVVY TVRNLTEGLL VISLIPLIGS PLICGVEVLA 360 VLQADIAINV TEAAAMHALK NALNVPERMG WNGDPCAPTE WDAWEGVTCN LAADGSSLVI 420 THMNIADQGL SGVLPAQLTD LSHLVSLNAS SNKVSGPLPA TLGASNLVSL DLSFNALEGP 480 IPVTLGSPGM QHLRLNNNRL AGPVPESIYA IGVHGGYINL AENQGLCGVP SLPDCAYKWK 540 HEGMSSAVKA VLAIGVLLAA AIVVCGAYVY IQRKKAQQDY NFNLPHQLVE RTKWYQQHKM 600 TKQADLEGVS MIQSSIPNRF GFSSNITSRE * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 2.0e-9 | 423 | 508 | 87 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 4.0e-10 | 404 | 531 | 149 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-10 | 420 | 535 | 143 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam12819 | Malectin_like | 3.0e-44 | 30 | 333 | 322 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
PLN03150 | PLN03150 | 8.0e-113 | 23 | 535 | 527 | + hypothetical protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001041980.1 | 0 | 19 | 607 | 27 | 624 | Os01g0140400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_564237.2 | 0 | 30 | 607 | 32 | 613 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
RefSeq | XP_002281668.1 | 0 | 23 | 607 | 26 | 612 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
RefSeq | XP_002457393.1 | 0 | 30 | 607 | 32 | 618 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
RefSeq | XP_002524408.1 | 0 | 23 | 591 | 19 | 587 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4hq1_A | 0.00000001 | 372 | 508 | 28 | 156 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 4hq1_A | 0.0002 | 438 | 505 | 228 | 296 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 4hq1_A | 0.001 | 434 | 504 | 152 | 225 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |