CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s85_169V6.1
FamilyAA7
Protein PropertiesLength: 518 Molecular Weight: 57611.5 Isoelectric Point: 6.1891
ChromosomeChromosome/Scaffold: 85 Start: 1263682 End: 1272963
Descriptiontubulin beta chain 3
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA74065034.9e-24
  GRAVGGGWGFSSTKFGIVSDNILGALAIANGTLVTATANQNSNLFFALCGASANSFDIVTQFTFRVHDVSFPVTHFKYTWIMKNQQFQSFKAFQTWGV
Full Sequence
Protein Sequence     Length: 518     Download
MREILHIQGG QCGNQIGSKF WEVVCEEHGI DPTGSYKGVT DLQLERINVY FDEASGGRYV    60
PRAVLMDLEP GTMDSVRTGP YGQIFRPDNF VFGQTGAGNN WAKGHYTEGA ELIDSVLDVV    120
RKEVESCDCL QGFQFCHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVF PSPKVSDTVV    180
EPYNATLSVH QLVENADECM VLDNEALYDI CFRTLKLITP SFGDLNHLIS ATMSGITCCL    240
RFPGQLNSDL RKLAVNLIPF PRLHFFMIGF APLTSRGSQQ YRSLTVPELT QQMWDSKNMM    300
CAADPRHGRY LTASAVFRGK VSTKEVDEQM INVQNKNSSY FVEWIPNNVK SSVCDIPPTG    360
LKMSSTFIGN STSIQEMFRR VVIHEHHQNS YTNKCDPWAM EATRFGRAVG GGWGFSSTKF    420
GIVSDNILGA LAIANGTLVT ATANQNSNLF FALCGASANS FDIVTQFTFR VHDVSFPVTH    480
FKYTWIMKNQ QFQSFKAFQT WGVEISDYIL ASLYMDP* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06059Tubulin6.0e-1303380379+
PLN00220PLN0022001381381+
cd02187beta_tubulin02381380+
PTZ00010PTZ0001001384384+
COG5023COG502301381384+
Gene Ontology
GO TermDescription
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005874microtubule
GO:0006184GTP catabolic process
GO:0007017microtubule-based process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001766554.1013811381predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001766602.1013811381predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001767462.1013811381predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001777263.1013811381predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001779193.1013811381predicted protein [Physcomitrella patens subsp. patens]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3n2k_D013811381A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
PDB3n2k_B013811381A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
PDB3n2g_D013811381A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
PDB3n2g_B013811381A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
PDB3hke_D013811381A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO77753038113810
HO78029638113810
DN55181438113810
HO77780638113810
HO77758838313810
Orthologous Group
SpeciesID
Physcomitrella patensPp1s128_133V6.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny