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Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s86_213V6.1 |
Family | GT35 |
Protein Properties | Length: 977 Molecular Weight: 109909 Isoelectric Point: 8.9448 |
Chromosome | Chromosome/Scaffold: 86 Start: 1372596 End: 1377682 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 203 | 971 | 0 |
ALRKLGHDLENVAEQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFHQEIDKDGQHEVVENWLEMGYPWEIARHDICYPIKFFGKTFETS GGKEWIGGEDIEAVAYDVPIPGYQTKNTICLRLWSTKVSPQNFDLDAFNAGDYDKAAALRNNAQRICHVLYPGDATVEGKLLRLKQQYTLCSASIQDMIA RYKEWSGTKVDWNKFSTKVAIQMNDTHPTLCIPELMRILMDVEGLSWDQAWGITRATVAYTNHTVLPEALEKWPMPILQTLLPRHAEIIERIDKEFIKSL AKMERGTKLEEMVARMRVLENVERDEGSKKALEKPNPAVVKPSVEPYEDVKAKRDGTKKASIDKKTPVKLEVMVRMANLSVIAGNKVNGVAAIHSEILKN EVFRDFYKIWPGKFQNKTNGVTPRRWLAYCNPELSAVITKWLGSRDWVLHAELLAGLRKHTTNQDFLKEWRLAKYVRKQKLAGFIKERTGYVVNPNSMFD IQIKRIHEYKRQLMNIMGVIHRYLKMKDMNPKERAVKYVPRVCIFGGKAFATYLQAKRIVKLIIDVAAVVNEDPDIGELLKVIFVPDYNVSAAEMLIPAS DLSQHISTAGMEASGTSNMKFAMNGCVLIGTLDGANVEIRTEVGADNFFLFGATVDQIQGFRSERAAGKFTPSKAFEDVKKFIRSGALGKYDYADMLESL EGDEGFGKADYFLVGKDFPDYVECQERIDKAYRNQESWTKMSILNTAGSSKFSSDRTIHEYAKEIWGVK |
Full Sequence |
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Protein Sequence Length: 977 Download |
MAALVQGSVC SALACPQRTN RFADRSEIVT ECLVSKSSFL TGARLKTCCK GGLRCSSRTD 60 VRLRPMRCGP KKPSKPGDQS NSPESPRSSF SKGDEILACL LHIAIPSAPN PAATDPEGIV 120 SRIKYHANYS SMFNPFKFEL KQAYFAAAHS VRDCLIQRWN DTYKHFKTTN AKAVHYLSME 180 FLQGRALTNA IGNLELKSEY AQALRKLGHD LENVAEQEPD AALGNGGLGR LASCFLDSLA 240 TLNYPAWGYG LRYKYGLFHQ EIDKDGQHEV VENWLEMGYP WEIARHDICY PIKFFGKTFE 300 TSGGKEWIGG EDIEAVAYDV PIPGYQTKNT ICLRLWSTKV SPQNFDLDAF NAGDYDKAAA 360 LRNNAQRICH VLYPGDATVE GKLLRLKQQY TLCSASIQDM IARYKEWSGT KVDWNKFSTK 420 VAIQMNDTHP TLCIPELMRI LMDVEGLSWD QAWGITRATV AYTNHTVLPE ALEKWPMPIL 480 QTLLPRHAEI IERIDKEFIK SLAKMERGTK LEEMVARMRV LENVERDEGS KKALEKPNPA 540 VVKPSVEPYE DVKAKRDGTK KASIDKKTPV KLEVMVRMAN LSVIAGNKVN GVAAIHSEIL 600 KNEVFRDFYK IWPGKFQNKT NGVTPRRWLA YCNPELSAVI TKWLGSRDWV LHAELLAGLR 660 KHTTNQDFLK EWRLAKYVRK QKLAGFIKER TGYVVNPNSM FDIQIKRIHE YKRQLMNIMG 720 VIHRYLKMKD MNPKERAVKY VPRVCIFGGK AFATYLQAKR IVKLIIDVAA VVNEDPDIGE 780 LLKVIFVPDY NVSAAEMLIP ASDLSQHIST AGMEASGTSN MKFAMNGCVL IGTLDGANVE 840 IRTEVGADNF FLFGATVDQI QGFRSERAAG KFTPSKAFED VKKFIRSGAL GKYDYADMLE 900 SLEGDEGFGK ADYFLVGKDF PDYVECQERI DKAYRNQESW TKMSILNTAG SSKFSSDRTI 960 HEYAKEIWGV KPSLVP* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 122 | 970 | 859 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 123 | 970 | 857 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 203 | 972 | 776 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14986 | PRK14986 | 0 | 146 | 972 | 836 | + glycogen phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 144 | 972 | 834 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27267.1 | 0 | 113 | 976 | 80 | 933 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001762173.1 | 0 | 75 | 975 | 17 | 922 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001766716.1 | 0 | 113 | 976 | 1 | 871 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001775705.1 | 0 | 110 | 973 | 97 | 972 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002274575.1 | 0 | 113 | 976 | 101 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 143 | 972 | 68 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 143 | 972 | 68 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1z8d_A | 0 | 141 | 973 | 50 | 831 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2gj4_A | 0 | 141 | 973 | 38 | 819 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 4el5_A | 0 | 141 | 973 | 38 | 819 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 865 | 143 | 977 | 0 |
HO797178 | 401 | 577 | 977 | 0 |
HO418036 | 570 | 328 | 891 | 0 |
HO613954 | 499 | 479 | 977 | 0 |
HO620767 | 403 | 575 | 977 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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