| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s8830_1V6.1 |
| Family | GH3 |
| Protein Properties | Length: 376 Molecular Weight: 41030.6 Isoelectric Point: 4.9679 |
| Chromosome | Chromosome/Scaffold: 8830 Start: 8 End: 1135 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH3 | 288 | 375 | 9.1e-27 |
| DIPLFLGIDQEGGVVKRIPGGTNLPGQMALGATGDTTLAEAAGRLTGEELKALGLQVNFAPVLDINSNPDNPIIGMRSFSSDPDLVTR | |||
| Full Sequence |
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| Protein Sequence Length: 376 Download |
| MNVKLITIFG AVLGSVLVWA GSAAAEERFT DLQHSKWAED GITYMSERGT VAGYGNGKFM 60 PERQVTRAQA VTFMVRELYP QELQQETGDG MTYTDVPKNH PFYLEIAIAA KHGLASGFPD 120 STFHPDAPMS RAETAAFLTR AYSLVKGQQP VTITDTAKHW AAAPILIMSS NGLIGGYSDS 180 TFRPDRSVTR AEFAVFMSRV IRFERQGAIQ AQDWDKLMSY MTVSEQVGQM LMPDIRQWNG 240 QVTTTVNEGV KRSIHDQDLG GLILFDKNIV DARQVTTLTH DLQMEAGDIP LFLGIDQEGG 300 VVKRIPGGTN LPGQMALGAT GDTTLAEAAG RLTGEELKAL GLQVNFAPVL DINSNPDNPI 360 IGMRSFSSDP DLVTRL |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00395 | SLH | 1.0e-8 | 154 | 194 | 42 | + S-layer homology domain. | ||
| pfam00395 | SLH | 2.0e-9 | 92 | 135 | 44 | + S-layer homology domain. | ||
| PRK05337 | PRK05337 | 4.0e-22 | 260 | 376 | 124 | + beta-hexosaminidase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-26 | 222 | 376 | 156 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| COG1472 | BglX | 3.0e-37 | 221 | 376 | 157 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_241541.1 | 9.80909e-45 | 215 | 376 | 132 | 293 | beta-hexosamidase A precursor [Bacillus halodurans C-125] |
| RefSeq | XP_001786980.1 | 0 | 1 | 376 | 1 | 376 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | YP_001813820.1 | 0 | 215 | 376 | 40 | 206 | glycoside hydrolase family 3 protein [Exiguobacterium sibiricum 255-15] |
| RefSeq | YP_002885774.1 | 0 | 218 | 376 | 46 | 209 | Beta-N-acetylhexosaminidase [Exiguobacterium sp. AT1b] |
| RefSeq | ZP_05129838.1 | 2.94273e-44 | 213 | 376 | 37 | 211 | beta-hexosamidase A [Clostridium sp. 7_2_43FAA] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gyk_B | 2.00386e-43 | 188 | 376 | 15 | 207 | A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8 |
| PDB | 4gyk_A | 2.00386e-43 | 188 | 376 | 15 | 207 | A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8 |
| PDB | 4gyj_B | 2.00386e-43 | 188 | 376 | 15 | 207 | A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) |
| PDB | 4gyj_A | 2.00386e-43 | 188 | 376 | 15 | 207 | A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) |
| PDB | 3nvd_B | 2.00386e-43 | 204 | 376 | 25 | 203 | A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | RXN-12625 | EC-3.2.1.52 | β-L-N-acetylhexosaminidase |
| chitin degradation II | RXN-12626 | EC-3.2.1.52 | β-L-N-acetylhexosaminidase |
| Signal Peptide | |||||
|---|---|---|---|---|---|
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| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GR350831 | 128 | 254 | 376 | 5e-27 |
| HS072488 | 116 | 258 | 371 | 0.000000000002 |
| GW447885 | 116 | 258 | 371 | 0.000000000002 |
| GW461875 | 116 | 258 | 371 | 0.000000000002 |
| HS073124 | 116 | 258 | 371 | 0.000000000002 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Physcomitrella patens | Pp1s44_194V6.1 | ||||
| Picea abies | MA_158781g0150 | ||||
| Ricinus communis | 31686.m000027 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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