Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s97_6V6.1 |
Family | AA5 |
Protein Properties | Length: 606 Molecular Weight: 66967.4 Isoelectric Point: 9.6962 |
Chromosome | Chromosome/Scaffold: 97 Start: 61266 End: 63680 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 33 | 605 | 0 |
DAGLGQWRLVTQNAGISAMHAAVAPVSGVVVLLHHTNSGPSNITFPDGRCRNTTYDRLLKKDCFAHSVILDPWTGVVRPVMVMTDTQCSSGQFLGDGTLS QTGGDAEGTKRTRKLSPKCYTTVAQKRYCDWVEGGNGTVLLSQRWYSTNTLLPDARQIIVGGRNTFTLEYFPRYSPPSPKAGLIYLQFLNDTADAKGPNN YYPFVHLLPTNQLYIFANRDSILYDYKQNVVLRKFDKIPGNPRNYPSGGSSVMLPLLYNDNFKKVEILVCGGAAVGSVANVKAQMNCSTSCGRLDVLRKN STWAMETMPMPRCMGDMVLLPDLNVMIINGAKRGFQGWKCGSEPTLNPVLYEPRKIAGNRFTVLNPTQTPRVYHSTANLLTDGSIMLAGSNTNRYYAFKP KTSTVDFPTELSVETFMPPYAENQPNSGGRPVIISVNATTVRYRSTLELLFWDYPSNGASAAPSPPPSPSSSSSSPPPPPPPVSNPDRFDFTMNSSPWST HSFSHGQRVVTLYPISLTTQPESRFENGRWVNVRTVQLRVPSYSTVLPQTYYMLWVVKNGNPSTSCVWIRVRG |
Full Sequence |
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Protein Sequence Length: 606 Download |
MEHGNALSRR KWEQWRLVMT VLAIGLSSLQ AVDAGLGQWR LVTQNAGISA MHAAVAPVSG 60 VVVLLHHTNS GPSNITFPDG RCRNTTYDRL LKKDCFAHSV ILDPWTGVVR PVMVMTDTQC 120 SSGQFLGDGT LSQTGGDAEG TKRTRKLSPK CYTTVAQKRY CDWVEGGNGT VLLSQRWYST 180 NTLLPDARQI IVGGRNTFTL EYFPRYSPPS PKAGLIYLQF LNDTADAKGP NNYYPFVHLL 240 PTNQLYIFAN RDSILYDYKQ NVVLRKFDKI PGNPRNYPSG GSSVMLPLLY NDNFKKVEIL 300 VCGGAAVGSV ANVKAQMNCS TSCGRLDVLR KNSTWAMETM PMPRCMGDMV LLPDLNVMII 360 NGAKRGFQGW KCGSEPTLNP VLYEPRKIAG NRFTVLNPTQ TPRVYHSTAN LLTDGSIMLA 420 GSNTNRYYAF KPKTSTVDFP TELSVETFMP PYAENQPNSG GRPVIISVNA TTVRYRSTLE 480 LLFWDYPSNG ASAAPSPPPS PSSSSSSPPP PPPPVSNPDR FDFTMNSSPW STHSFSHGQR 540 VVTLYPISLT TQPESRFENG RWVNVRTVQL RVPSYSTVLP QTYYMLWVVK NGNPSTSCVW 600 IRVRG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 2.0e-5 | 523 | 603 | 82 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-9 | 523 | 603 | 82 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 9.0e-88 | 51 | 304 | 255 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001762124.1 | 0 | 36 | 602 | 14 | 524 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001767845.1 | 0 | 36 | 605 | 16 | 547 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001769315.1 | 0 | 261 | 604 | 101 | 435 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771982.1 | 0 | 9 | 603 | 10 | 546 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001778975.1 | 0 | 36 | 601 | 23 | 530 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eic_A | 0.000003 | 6 | 421 | 128 | 511 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eib_A | 0.00001 | 6 | 421 | 128 | 511 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz3_A | 0.00002 | 6 | 421 | 128 | 511 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz1_A | 0.00002 | 6 | 421 | 128 | 511 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2jkx_A | 0.00002 | 6 | 421 | 128 | 511 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292873 | 363 | 17 | 378 | 0 |
GO368286 | 311 | 120 | 430 | 0 |
DY303362 | 377 | 39 | 413 | 0 |
CO164717 | 288 | 100 | 387 | 0 |
EX306064 | 292 | 131 | 422 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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