CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s98_254V6.1
FamilyGT92
Protein PropertiesLength: 493 Molecular Weight: 55888.6 Isoelectric Point: 7.2389
ChromosomeChromosome/Scaffold: 98 Start: 1457836 End: 1459898
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922144450
  DLAFCGSPLYGNISPQRVREWIAYHAWFFGNRTLFMFHDAGGIHDDVYRVLKPWIDLGRVQVQNLRQAEVYEGYYHHQFTILNDCLMRSQTLASWTFFFD
  IDEYLYIPEAHSPRAILNLLAEQARNNVTQILFKNIKISDALCEKSNKTTTEAQSMAKQSRKWAFEKLVYADCNYGWEPVESRKYALQPQLVWATGVHYS
  EHLKQGHYITMDPTVLRSYHYHNTLNGRWETC
Full Sequence
Protein Sequence     Length: 493     Download
MKSSTGKILE RIPASGTCFS VVAVLVILNC LLLGFQISSN AGRYESTWWL ASAPPMACTN    60
ASFALDEKLN MSSIDLSKGE VRSFRAHGVA SRLIIEVGSY RNGPRTFSSV VMTSKLLNEL    120
HDITHECEWV TSDSKALRVK AMAIKPDWNM GRLYGTMVLV CNFPRDVGTD AEGGQMILTA    180
GYSDSYRIPE RFVALTEMRG EYSASHFQQP YSYDLAFCGS PLYGNISPQR VREWIAYHAW    240
FFGNRTLFMF HDAGGIHDDV YRVLKPWIDL GRVQVQNLRQ AEVYEGYYHH QFTILNDCLM    300
RSQTLASWTF FFDIDEYLYI PEAHSPRAIL NLLAEQARNN VTQILFKNIK ISDALCEKSN    360
KTTTEAQSMA KQSRKWAFEK LVYADCNYGW EPVESRKYAL QPQLVWATGV HYSEHLKQGH    420
YITMDPTVLR SYHYHNTLNG RWETCKDFPQ HPNGGPNSVN VTNCTTDHAM LSFAPAVKSY    480
ELATIGEQPF LL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam01697Glyco_transf_925.0e-25213464270+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001757048.106949185504predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001758982.10934863385predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001767951.10824481349predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001777796.10974921382predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001778370.10824511356predicted protein [Physcomitrella patens subsp. patens]
Transmembrane Domains
StartEnd
1335
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
AW4772801543404930
BJ96485413711370
HO780532421824880
GE480447314683780
ES799092304823850
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1Pp1s32_144V6.1
Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1Pp1s25_268V6.1
Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)