| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s99_248V6.1 |
| Family | GH2 |
| Protein Properties | Length: 900 Molecular Weight: 99870.7 Isoelectric Point: 5.15 |
| Chromosome | Chromosome/Scaffold: 99 Start: 1288323 End: 1293236 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 15 | 744 | 0 |
| DLNQGWVAARASDVSQGGKELTTGEVIPAVEPNTPWIKGVVPGTILTTLLSNGLIADPLYGLNNEAIPDMGDVGREYYTFWFYNSFELAAPIPEHGKVWL QFRAINYQAEVFLNGHSKLLSKGMFLRHTVDITDWINSDGGVNRLAVLVHPPDHPGHIPLEGGQGGDHDIGKDVAAQYVEGWDWICAIRDRNTGIWDKVT VFQTGPVRLVDPHLVATFPSSTYTEAQLWVTVELVNTASAKIKATISVSATLEDQESLGTSTISATQVVEVNAKSTLQYSLFPILVENPALWWPNGMGEH PLYKVDVTVEAGGFSGLSDSWSHMFGFRHIASHIDTATNGRKFEVNGEAIFIRGGNWIVSDALLRLSKERYNAEIGFHAAMNLNMIRIWAGALAERPEFY DACDRHGLLVWQEFWITGDCNGRGQPPSNAEWPLDHELWLTCAYDTVKLLRNHASLTLWCGGNEQHPADDLNDALTKALVIVSPDSGNPSQSIDGTRLYI EGSLWSGIAAGNGLFRDGPYTIQIPENFFTEYYYSYAFNPEIGNVGVPNADTIRSTMPPEAWDPPDALAGEHPNATWFYHKYIAYADGQNLIPGQIEAFG TYNSLDDFCEKAQLVNYHQYRALIEGWNTWMWTHYTGVLIWKTQNPWPGLRGQMYDHLLDQTGAYFGLRYAAEPLHVQLNLLTYNIEIVNTTRTTLTNAT LQAIAYDVDGNTPWSQTFPAVTAASKKTLI | |||
| Full Sequence |
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| Protein Sequence Length: 900 Download |
| MVTLPMSKLG LAAIDLNQGW VAARASDVSQ GGKELTTGEV IPAVEPNTPW IKGVVPGTIL 60 TTLLSNGLIA DPLYGLNNEA IPDMGDVGRE YYTFWFYNSF ELAAPIPEHG KVWLQFRAIN 120 YQAEVFLNGH SKLLSKGMFL RHTVDITDWI NSDGGVNRLA VLVHPPDHPG HIPLEGGQGG 180 DHDIGKDVAA QYVEGWDWIC AIRDRNTGIW DKVTVFQTGP VRLVDPHLVA TFPSSTYTEA 240 QLWVTVELVN TASAKIKATI SVSATLEDQE SLGTSTISAT QVVEVNAKST LQYSLFPILV 300 ENPALWWPNG MGEHPLYKVD VTVEAGGFSG LSDSWSHMFG FRHIASHIDT ATNGRKFEVN 360 GEAIFIRGGN WIVSDALLRL SKERYNAEIG FHAAMNLNMI RIWAGALAER PEFYDACDRH 420 GLLVWQEFWI TGDCNGRGQP PSNAEWPLDH ELWLTCAYDT VKLLRNHASL TLWCGGNEQH 480 PADDLNDALT KALVIVSPDS GNPSQSIDGT RLYIEGSLWS GIAAGNGLFR DGPYTIQIPE 540 NFFTEYYYSY AFNPEIGNVG VPNADTIRST MPPEAWDPPD ALAGEHPNAT WFYHKYIAYA 600 DGQNLIPGQI EAFGTYNSLD DFCEKAQLVN YHQYRALIEG WNTWMWTHYT GVLIWKTQNP 660 WPGLRGQMYD HLLDQTGAYF GLRYAAEPLH VQLNLLTYNI EIVNTTRTTL TNATLQAIAY 720 DVDGNTPWSQ TFPAVTAASK KTLIVGQIPL FKSINTQPVY FLLLKLSSST TTLVSRNFYW 780 LHPIPGNYLQ LAGSYRSQKI DVKATATSKV SDDKLSYNIQ VLVENRTAVV AFGLRFRVHN 840 GNATGVDKRV LPVFYSDNWF SLVPNETATI DISFTISGKD VWPVLLFSGW NVAEKAVSF* 900 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02836 | Glyco_hydro_2_C | 0.0002 | 411 | 478 | 72 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| pfam02837 | Glyco_hydro_2_N | 5.0e-5 | 111 | 173 | 63 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 5.0e-9 | 124 | 478 | 370 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-12 | 221 | 342 | 123 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 4.0e-31 | 83 | 487 | 414 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE97370.1 | 0 | 6 | 899 | 1 | 945 | endo-beta-mannosidase [Brassica oleracea] |
| RefSeq | NP_563833.2 | 0 | 6 | 899 | 1 | 943 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| Swiss-Prot | Q5H7P5 | 0 | 16 | 898 | 6 | 951 | EBM_LILLO RecName: Full=Mannosylglycoprotein endo-beta-mannosidase; Short=Endo-beta-mannosidase; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 42 kDa subunit |
| RefSeq | XP_001768060.1 | 0 | 12 | 899 | 11 | 898 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001769395.1 | 0 | 11 | 899 | 5 | 888 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 46 | 897 | 77 | 896 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 46 | 897 | 77 | 896 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 46 | 897 | 77 | 896 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_A | 0 | 46 | 897 | 77 | 896 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x05_B | 0 | 46 | 897 | 77 | 896 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 333 | 386 | 701 | 0 |
| GO871600 | 332 | 316 | 625 | 0 |
| FE492014 | 254 | 355 | 601 | 0 |
| FE475341 | 252 | 357 | 601 | 0 |
| GO848159 | 297 | 177 | 473 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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