| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s9_318V6.6 |
| Family | GH14 |
| Protein Properties | Length: 449 Molecular Weight: 50450.8 Isoelectric Point: 4.5918 |
| Chromosome | Chromosome/Scaffold: 9 Start: 2170701 End: 2174624 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 22 | 436 | 0 |
| YVMLPLSTISNENKVADPEKLKEDLDKLKRASVDGVMIDCWWGIVEGVTPQVYDWSAYYDLFSMVRDCKLKLQAIMSFHQCGGNVGDDVFIPLPAWVLRV GKENPDIFFTNRAGVRNPESLTFGIDDEAVLDSRTALEVYYDFMESFRKDMQEFLEDGTITEIEVGMGPCGELRYPSYPETQGWKYPGTGEFQCWDKYLL KNLKNAANEKEHPEWGVGPADAGDYNCTPHNSAFFEEGRKSPYGEFFLDWYSRALIEHGDNLLTVARHALGNTKLAVKVSGIHWWYKSASHAAELAAGYY NQASKCGYTPIAKMLATHDATLNFTCVELRTADETVKFPGALADPEGLVSQVLRAAWEQGVEVAAENALSFYEKSGYDQILVQAKPKDYTNHHLSAFTYL RLTPELMEEQNLEEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MSIGEAEHAE CPSPVTPYIP TYVMLPLSTI SNENKVADPE KLKEDLDKLK RASVDGVMID 60 CWWGIVEGVT PQVYDWSAYY DLFSMVRDCK LKLQAIMSFH QCGGNVGDDV FIPLPAWVLR 120 VGKENPDIFF TNRAGVRNPE SLTFGIDDEA VLDSRTALEV YYDFMESFRK DMQEFLEDGT 180 ITEIEVGMGP CGELRYPSYP ETQGWKYPGT GEFQCWDKYL LKNLKNAANE KEHPEWGVGP 240 ADAGDYNCTP HNSAFFEEGR KSPYGEFFLD WYSRALIEHG DNLLTVARHA LGNTKLAVKV 300 SGIHWWYKSA SHAAELAAGY YNQASKCGYT PIAKMLATHD ATLNFTCVEL RTADETVKFP 360 GALADPEGLV SQVLRAAWEQ GVEVAAENAL SFYEKSGYDQ ILVQAKPKDY TNHHLSAFTY 420 LRLTPELMEE QNLEEFTQFV HKLHGAQC* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 4.0e-143 | 19 | 443 | 436 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-154 | 19 | 440 | 429 | + beta-amylase | ||
| PLN02705 | PLN02705 | 6.0e-161 | 16 | 445 | 437 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 16 | 445 | 433 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 18 | 447 | 439 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40370.1 | 0 | 16 | 445 | 108 | 540 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_001753432.1 | 0 | 1 | 448 | 1 | 448 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001755209.1 | 0 | 16 | 445 | 17 | 448 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001770103.1 | 0 | 16 | 445 | 114 | 546 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002320794.1 | 0 | 16 | 445 | 5 | 437 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1byd_A | 0 | 18 | 447 | 11 | 445 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| PDB | 1byc_A | 0 | 18 | 447 | 11 | 445 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| PDB | 1byb_A | 0 | 18 | 447 | 11 | 445 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| PDB | 1bya_A | 0 | 18 | 447 | 11 | 445 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| PDB | 1wdp_A | 0 | 18 | 447 | 11 | 445 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FC413330 | 244 | 54 | 297 | 0 |
| DC927621 | 247 | 22 | 268 | 0 |
| HO777976 | 443 | 15 | 447 | 0 |
| BU103692 | 431 | 19 | 443 | 0 |
| DC927621 | 39 | 263 | 301 | 0.000000000003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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