| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb0010s012040.1 |
| Family | GH3 |
| Protein Properties | Length: 792 Molecular Weight: 85112.3 Isoelectric Point: 9.5523 |
| Chromosome | Chromosome/Scaffold: 10 Start: 2664755 End: 2668266 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 95 | 348 | 0 |
| GVPRLGVPSYKWWNEALHGVAISGKGIHMNQGVRSATSFPQVLHTAASFNDNLWFRIGQATGKEARAFYNIGQAEGLTMWSPNVNIFRDPRWGRGQETPG EDPAVASRYGAAFVRGLQGSSSNTKSVPPVLQTSACCKHATAYDLEDWKGVSRYSFKATVTIQDLADTFNPPFRSCVVDGKASCVMCAYTIVNGVPSCAN GDLLTKTFRGSWGLDGYVAADCDAVAIMRNSQFYRPTAEDTVAATLKAGLDIDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 792 Download |
| MDDNASIRHH TTPSSTYHRR NPVMAAHVSV LLLVPALLMR VAVAGAPPFS CGPSSPSKGL 60 PFCNMKLPAS QRAADLVSRM TPAEKASQLG DIANGVPRLG VPSYKWWNEA LHGVAISGKG 120 IHMNQGVRSA TSFPQVLHTA ASFNDNLWFR IGQATGKEAR AFYNIGQAEG LTMWSPNVNI 180 FRDPRWGRGQ ETPGEDPAVA SRYGAAFVRG LQGSSSNTKS VPPVLQTSAC CKHATAYDLE 240 DWKGVSRYSF KATVTIQDLA DTFNPPFRSC VVDGKASCVM CAYTIVNGVP SCANGDLLTK 300 TFRGSWGLDG YVAADCDAVA IMRNSQFYRP TAEDTVAATL KAGLDIDCGP YIQQYAMAAI 360 QKGKLTQQDV DKAVKNLLTT RMRLGHFDGD PKTNVYGNLG AGHICTAEHK NLALEAALDG 420 IVLLKNSAGV LPLKRGTVNS AAVIGHNAND VLALLGNYWG PPCAPTTPLQ GIQGYVKNVK 480 FLAGCNKAAC NVAATPQATA LASSSDAVIL FMGLSQEQES EGKDRTTLLL PGNQQSLINA 540 VANAAKRPVI LVLLTGGPVD ITFAQANPKI GAILWAGYPG QAGGLAIAKV LFGEKNPSGK 600 LPNTWYPEEF TRIPMTDMRM RAAGSYPGRT YRFYNGKTIY KFGYGLSYSK FSHRVVTGRK 660 NPAHNTSLLA AGLAAMTEDN LSYHVEHIGD VVCDQLKFLA VVKVQNHGPI DGKHTALMFL 720 RWPSATDGRP TRQLIGFQSQ HIKAGEKANL RFEVSPCEHF SRVRQDGRKV IDKGSHFLKV 780 GKHELEISFG A* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 5.0e-48 | 97 | 450 | 361 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 8.0e-60 | 95 | 380 | 289 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-61 | 421 | 649 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 2.0e-71 | 61 | 756 | 775 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 30 | 789 | 774 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY80685.1 | 0 | 47 | 789 | 35 | 777 | hypothetical protein OsI_35867 [Oryza sativa Indica Group] |
| RefSeq | NP_001067726.1 | 0 | 47 | 791 | 35 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002489304.1 | 0 | 31 | 791 | 1 | 750 | hypothetical protein SORBIDRAFT_0010s007570 [Sorghum bicolor] |
| RefSeq | XP_002489310.1 | 0 | 41 | 791 | 20 | 772 | hypothetical protein SORBIDRAFT_0010s010920 [Sorghum bicolor] |
| RefSeq | XP_002489311.1 | 0 | 1 | 791 | 1 | 791 | hypothetical protein SORBIDRAFT_0010s012040 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 131 | 781 | 91 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u48_A | 0 | 131 | 781 | 91 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u4a_B | 0 | 131 | 781 | 91 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u4a_A | 0 | 131 | 781 | 91 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 2x41_A | 1e-36 | 96 | 781 | 46 | 699 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
