| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb0073s002050.1 |
| Family | GH116 |
| Protein Properties | Length: 604 Molecular Weight: 68635.4 Isoelectric Point: 5.2585 |
| Chromosome | Chromosome/Scaffold: 73 Start: 22413 End: 31925 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH116 | 187 | 549 | 0 |
| GKFLYLEGIEYFMWCTYDVHFYASFALLDLFPKIELSIQRDFARAVLREDNRRVRFLADGTWGIRKVIGAVAHDLGAHDPWHELNAYNIHDTSRWKDLNP KFVLQIYRDFAATGDKSFGKDVWPAVCTAMEYMEQFDHDGDDMIENDGFPDQTYDAWTVQGVSAYCGCLWLAALQAAAALARSLGHDDYAERCMTRFAKA KSVFEARLWNGSYFNYDSGTSYNSRSIQADQLAGQWYTASSGLPPLFDEDRIKCTLQKIFDYNVMRVKGGRMGAVNGMHPNGKVDDTCMQSREIWTGVTY SLAATMLLHGMEHQAFTTAEGIYIAGWSEEGYGYWFQTPEAWTIDGHYRSLIYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 604 Download |
| MWGTMVQDGS FDRDNFSAGP SMPCLLGDTV CAAVSASTWV EPHGRCTVAF ALAWSSPKVK 60 FKKGSTYYRR YTKFYGTSPR SAVNLVEDAL MKYKHWEEAI DKWQTPILRD ERLPEWYKIT 120 LFNELYFLVA GGTVWIDSES LVSDADNKLN PSPPEDSNFP FHDSTCNSTV PLIGFDPHEI 180 DDKENVGKFL YLEGIEYFMW CTYDVHFYAS FALLDLFPKI ELSIQRDFAR AVLREDNRRV 240 RFLADGTWGI RKVIGAVAHD LGAHDPWHEL NAYNIHDTSR WKDLNPKFVL QIYRDFAATG 300 DKSFGKDVWP AVCTAMEYME QFDHDGDDMI ENDGFPDQTY DAWTVQGVSA YCGCLWLAAL 360 QAAAALARSL GHDDYAERCM TRFAKAKSVF EARLWNGSYF NYDSGTSYNS RSIQADQLAG 420 QWYTASSGLP PLFDEDRIKC TLQKIFDYNV MRVKGGRMGA VNGMHPNGKV DDTCMQSREI 480 WTGVTYSLAA TMLLHGMEHQ AFTTAEGIYI AGWSEEGYGY WFQTPEAWTI DGHYRSLIYM 540 RPLAIWAMQW ALSPPRSILE APKVNTMDRA HISPGTFQFL QDSVRKMTPK NGCFGNTVIN 600 WDC* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.004 | 273 | 419 | 169 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 7.0e-9 | 2 | 96 | 96 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 7.0e-80 | 50 | 552 | 521 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-155 | 187 | 550 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC81952.1 | 0 | 1 | 603 | 247 | 850 | hypothetical protein OsI_25831 [Oryza sativa Indica Group] |
| GenBank | EEE67087.1 | 0 | 1 | 603 | 247 | 838 | hypothetical protein OsJ_24071 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059529.1 | 0 | 117 | 603 | 13 | 500 | Os07g0444000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146319.1 | 0 | 1 | 603 | 1 | 649 | hypothetical protein LOC100279895 [Zea mays] |
| RefSeq | XP_002489100.1 | 0 | 1 | 603 | 1 | 603 | hypothetical protein SORBIDRAFT_0073s002050 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT051521 | 332 | 239 | 570 | 0 |
| GT032792 | 325 | 239 | 563 | 0 |
| GT033883 | 334 | 127 | 460 | 0 |
| GT051618 | 330 | 266 | 594 | 0 |
| GT045992 | 338 | 253 | 589 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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