| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g002630.1 |
| Family | GH5 |
| Protein Properties | Length: 449 Molecular Weight: 49284.7 Isoelectric Point: 6.5173 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2136555 End: 2139282 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 50 | 381 | 1.3e-35 |
| VDDGRPIYFSGFNAYWLMLVASDPARRGKVVAAFRQAADHGLNLARTWAFSDGGDTPLQAAPGVYDEAMFQGLDFVVAEARRHGIYLLLCLTNNFHDFGG KRQYVQWARDAGHRLATDDDFFNSTVVKDYYKNHVKTVLTRVNTLTGVAYKDDPTILGWELMNEPRCDAEPTGAMVQAWVEEMAPYVKSIDGEHLVTAGL EGFYGAGAHESKDLNPWGIYYGTNFVETHRARGVDFATIHLYPDVWLWGSAADAQLAFLRNWTRSHARDADLYLRKPLLVTEYGKFLWEGVAGANRTQRD YFLRLVLDSIYDSAARGGPLVGGAFWQLLDGG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MAKAKPRPAA AILLLLISFL AAAAAGGGSD AETTGGGGGM VGVDGTRFVV DDGRPIYFSG 60 FNAYWLMLVA SDPARRGKVV AAFRQAADHG LNLARTWAFS DGGDTPLQAA PGVYDEAMFQ 120 GLDFVVAEAR RHGIYLLLCL TNNFHDFGGK RQYVQWARDA GHRLATDDDF FNSTVVKDYY 180 KNHVKTVLTR VNTLTGVAYK DDPTILGWEL MNEPRCDAEP TGAMVQAWVE EMAPYVKSID 240 GEHLVTAGLE GFYGAGAHES KDLNPWGIYY GTNFVETHRA RGVDFATIHL YPDVWLWGSA 300 ADAQLAFLRN WTRSHARDAD LYLRKPLLVT EYGKFLWEGV AGANRTQRDY FLRLVLDSIY 360 DSAARGGPLV GGAFWQLLDG GMDTLRDGYE IILPEDRLAA TIIGNHSRQL AQLSLVTFTG 420 EDVDIEAAAL RRRSRRSPHS NRKIRLAG* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.0007 | 198 | 291 | 103 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| COG2730 | BglC | 6.0e-5 | 83 | 215 | 139 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 2.0e-9 | 52 | 333 | 287 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 4.0e-22 | 81 | 389 | 309 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL79758.1 | 0 | 40 | 435 | 1 | 397 | AC096687_22 putative endohydrolase [Oryza sativa Japonica Group] |
| GenBank | EAZ29139.1 | 0 | 40 | 446 | 1 | 398 | hypothetical protein OsJ_13202 [Oryza sativa Japonica Group] |
| GenBank | EEC76450.1 | 0 | 40 | 446 | 1 | 398 | hypothetical protein OsI_14158 [Oryza sativa Indica Group] |
| RefSeq | NP_001051777.1 | 0 | 37 | 446 | 20 | 420 | Os03g0828500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463596.1 | 0 | 1 | 448 | 1 | 448 | hypothetical protein SORBIDRAFT_01g002630 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 40 | 414 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 52 | 387 | 23 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 52 | 387 | 23 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 52 | 387 | 23 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 52 | 387 | 23 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
