CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb01g002910.1
FamilyGT2
Protein PropertiesLength: 243 Molecular Weight: 27086.5 Isoelectric Point: 9.5106
ChromosomeChromosome/Scaffold: 1 Start: 2376848 End: 2379525
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT2121800
  SIIVPTYNERLNVALIVYLIFKHLPDVNFEIIIVDDGSPDGTQDIVKQLQQVYGEDFVLLRARPRKLGLGTAYLHGLKHASGEFVIIMDADLSHHPKYLP
  SFIRKQKETGADIVTGTRYVKNGGVHGWNLMRKLTSRGANVLAQTLLQPGASDLTGSFRLYKRDVLEDL
Full Sequence
Protein Sequence     Length: 243     Download
MEAAAGRKRA YSIIVPTYNE RLNVALIVYL IFKHLPDVNF EIIIVDDGSP DGTQDIVKQL    60
QQVYGEDFVL LRARPRKLGL GTAYLHGLKH ASGEFVIIMD ADLSHHPKYL PSFIRKQKET    120
GADIVTGTRY VKNGGVHGWN LMRKLTSRGA NVLAQTLLQP GASDLTGSFR LYKRDVLEDL    180
ISSCVSKGYV FQMEMIVRAT RKGYHIEEVP ITFVDRVFGI SKLGGSEIVE YLKGLVYLLL    240
TT* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00535Glycos_transf_22.0e-3612180170+
cd04188DPG_synthase4.0e-4113215208+
cd04179DPM_DPG-synthase_like2.0e-6813199188+
cd06442DPM1_like4.0e-13013238226+
PLN02726PLN027263.0e-1791242243+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEEC76440.1022423243hypothetical protein OsI_14131 [Oryza sativa Indica Group]
RefSeqNP_001051751.1022423243Os03g0824400 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001140901.1012421242hypothetical protein LOC100272978 [Zea mays]
RefSeqNP_564118.1012425246dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative [Arabidopsis thaliana]
RefSeqXP_002466177.1012421242hypothetical protein SORBIDRAFT_01g002910 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2z86_D0.00000021211496196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
PDB2z86_C0.00000021211496196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
PDB2z86_B0.00000021211496196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
PDB2z86_A0.00000021211496196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
PDB2z87_B0.00000021211495195A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesis2.4.1.83-RXNEC-2.4.1.83dolichyl-phosphate β-D-mannosyltransferase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CJ60034224132430
CJ553077233112430
CA19056122212220
JG92928322512250
CJ70581323762420
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00839.1Aquca_007_00839.2
Arabidopsis lyrata889509
Arabidopsis thalianaAT1G20575.1
Brachypodium distachyonBradi2g19800.1
Brassica rapaBra025828Bra012235
Capsella rubellaCarubv10010457mCarubv10010118m
Chlamydomonas reinhardtiiCre03.g150950.t1.1
Citrus clementinaCiclev10003501m
Citrus sinensisorange1.1g026146m
Cucumis sativusCucsa.272070.1Cucsa.272070.2Cucsa.272070.3Cucsa.272070.4
Eucalyptus grandisEucgr.F01769.1
Fragaria vescamrna01849.1-v1.0-hybrid
Glycine maxGlyma13g24040.2Glyma07g32560.4Glyma07g32560.3Glyma07g32560.1Glyma13g24040.1
Gossypium raimondiiGorai.005G113700.2Gorai.005G113700.1Gorai.005G113700.3Gorai.005G113700.4Gorai.002G116900.2
Gorai.002G116900.1
Linum usitatissimumLus10013228Lus10030748
Malus domesticaMDP0000284475
Manihot esculentacassava4.1_014960mcassava4.1_014955m
Medicago truncatulaMedtr2g097220.1
Mimulus guttatusmgv1a012434m
Oryza sativaLOC_Os03g60939.1
Panicum virgatumPavirv00006084mPavirv00010357mPavirv00010356mPavirv00041144mPavirv00011250m
Pavirv00010359m
Physcomitrella patensPp1s182_58V6.1
Phaseolus vulgarisPhvul.003G057700.1
Picea abiesMA_10426906g0010MA_158782g0100.50.214MA_159042g1170
Populus trichocarpaPotri.005G250900.1Potri.002G010300.1Potri.005G250900.2
Prunus persicappa010139m
Ricinus communis30170.m014358
Setaria italicaSi039247mSi037228m
Selaginella moellendorffii98270
Thellungiella halophilaThhalv10008599m
Vitis viniferaGSVIVT01008672001
Volvox carteriVocar20000557m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny